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PLM1_100_b1_sep16_scaffold_2656

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2656_1
unknown

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

293..1360
DNA (1068bp) protein (356aa)
polysaccharide deacetylase Tax=Novosphingobium sp. B-7 RepID=UPI0003B788B7
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP72785.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
PLM1_100_b1_sep16_scaffold_2656_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1363..2799
DNA (1437bp) protein (479aa)
Amidohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCL7_CONWI
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2656_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2852..3868)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2656_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4114..4971
DNA (858bp) protein (286aa)
N-acetylmannosamine kinase Tax=Clostridium sp. JC122 RepID=UPI00028A0381
SIS domain protein {ECO:0000313|EMBL:KIE48103.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RpiR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_2656_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5103..6134
DNA (1032bp) protein (344aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2656_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6172..6552
DNA (381bp) protein (127aa)
Translation initiation inhibitor, endoribonuclease Tax=Alcaligenes RepID=M5ITE1_9BURK
putative translation initiation inhibitor, endoribonuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM1_100_b1_sep16_scaffold_2656_8
unknown

Not on your lists

6580..7665
DNA (1086bp) protein (362aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_9
unknown

Not on your lists

7747..8799
DNA (1053bp) protein (351aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9024..9989
DNA (966bp) protein (322aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000370DFBD
F420-dependent N5 N10-methylene tetrahydromethanopterin reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2656_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10459..10809
DNA (351bp) protein (117aa)
4,5-dihydroxyphthalate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4,5-dihydroxyphthalate decarboxylase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_2656_12
unknown

Not on your lists

11023..11286
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..12280)
DNA (1047bp) protein (349aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putative aliphatic sulfonates-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2656_14
unknown

Not on your lists

comp(12267..13094)
DNA (828bp) protein (276aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_15
unknown

Not on your lists

comp(13345..13719)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2656_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13870..14769
DNA (900bp) protein (300aa)
Transcriptional regulator Tax=Caldanaerobacter subterraneus RepID=Q8RA85_THETN
RpiR3; transcriptional regulator
N-acetylmannosamine kinase {ECO:0000313|EMBL:ERM91861.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
PLM1_100_b1_sep16_scaffold_2656_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14794..16209
DNA (1416bp) protein (472aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 17 items

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