ggKbase home page

PLM1_100_b1_sep16_scaffold_3023

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3023_1
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18..287
DNA (270bp) protein (90aa)
Transcriptional regulator, AbrB family Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNU4_DESK7
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:AEG16847.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM1_100_b1_sep16_scaffold_3023_2
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

272..667
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
PilT protein domain protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNU3_DESK7
twitching motility protein PilT
PLM1_100_b1_sep16_scaffold_3023_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1008..2153)
DNA (1146bp) protein (382aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3023_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2192..3025
DNA (834bp) protein (278aa)
rhodanese; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
putative thiosulfate sulfurtransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3023_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3993
DNA (972bp) protein (324aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3023_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..5197
DNA (948bp) protein (316aa)
id=1811945 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3023_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5287..6330)
DNA (1044bp) protein (348aa)
Methyltransferase type 11 bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
type 11 methyltransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_3023_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6379..7536)
DNA (1158bp) protein (386aa)
MFS transporter bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily MFS_1
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_3023_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..8042)
DNA (264bp) protein (88aa)
id=2069135 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 9 items

View Taxonomy