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PLM1_100_b1_sep16_scaffold_3591

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3591_1
unknown

Not on your lists

comp(1..201)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3591_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(267..896)
DNA (630bp) protein (210aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilP; fimbrial assembly protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3591_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(903..1526)
DNA (624bp) protein (208aa)
Type IV pilus biogenesis protein PilO bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilus assembly protein PilO
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3591_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..2137)
DNA (615bp) protein (205aa)
Fimbrial assembly family protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_3591_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2134..3234)
DNA (1101bp) protein (367aa)
Type IV pilus biogenesis ATPase PilM bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilus assembly protein PilM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3591_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3238..3438)
DNA (201bp) protein (67aa)
Helix-turn-helix transcriptional regulator, XRE family bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
XRE family transcriptional regulator
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_3591_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..6051
DNA (2286bp) protein (762aa)
Replication restart DNA helicase PriA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
priA; primosomal protein N'
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_3591_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6061..6603
DNA (543bp) protein (181aa)
Peptide deformylase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptide deformylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3591_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6668..7600
DNA (933bp) protein (311aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3591_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7584..8954
DNA (1371bp) protein (457aa)
N utilization substance protein B-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sun protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3591_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8908..9546
DNA (639bp) protein (213aa)
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3591_trna_1
unknown

Not on your lists

9745..9818
DNA (74bp)
transferRNA Pro
PLM1_100_b1_sep16_scaffold_3591_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..10127)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3591_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10112..10354)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3591_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10410..10706)
DNA (297bp) protein (99aa)
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY45618.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Displaying 15 items

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