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PLM1_100_b1_sep16_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_16_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..527)
DNA (525bp) protein (175aa)
Regulatory protein TetR Tax=Frankia sp. (strain EuI1c) RepID=E3J722_FRASU
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADP84386.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_100_b1_sep16_scaffold_16_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(569..1513)
DNA (945bp) protein (315aa)
Acyl-CoA dehydrogenase, C-terminal Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW21_STRRD
acyl-CoA dehydrogenase, C-terminal
Acyl-CoA dehydrogenase, C-terminal {ECO:0000313|EMBL:ACZ84974.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1510..2670)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A636_THECD
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACZ00135.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_16_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2651..3487)
DNA (837bp) protein (279aa)
Enoyl-CoA hydratase/isomerase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A637_THECD
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACZ00136.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_16_5
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3498..3794)
DNA (297bp) protein (99aa)
Urea ABC transporter, ATP-binding protein UrtD Tax=Streptomyces sp. C RepID=D9VQF3_9ACTO
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:EFL18590.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
Branched-chain amino acid transport ATP-binding protein LivG
PLM1_100_b1_sep16_scaffold_16_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4204..6906)
DNA (2703bp) protein (901aa)
ABC-type branched-chain amino acid transport systems ATPase component-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW15_STRRD
branched-chain amino acid ABC transporter ATPase-like protein
ABC-type branched-chain amino acid transport systems ATPase component-like protein {ECO:0000313|EMBL:ACZ84968.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6910..8142)
DNA (1233bp) protein (411aa)
ABC-type branched-chain amino acid transport systems periplasmic component-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW14_STRRD
branched chain amino acid ABC transporter substrate-binding protein
ABC-type branched-chain amino acid transport systems periplasmic component-like protein {ECO:0000313|EMBL:ACZ84967.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_8
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8270..9718
DNA (1449bp) protein (483aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00037BFF72
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60261.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_16_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9729..10826
DNA (1098bp) protein (366aa)
Alcohol dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW13_STRRD
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:ACZ84966.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10816..11613)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003641D9F
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ90857.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11710..13965
DNA (2256bp) protein (752aa)
hypothetical protein Tax=Longispora albida RepID=UPI000372AEA8
MMPL domain protein
MMPL domain protein {ECO:0000313|EMBL:ADB50817.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_16_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14071..15123)
DNA (1053bp) protein (351aa)
Beta-lactamase domain protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6U6_THEBD
Beta-lactamase {ECO:0000313|EMBL:ETK31942.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
beta-lactamase domain-containing protein
PLM1_100_b1_sep16_scaffold_16_13
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15300..16175)
DNA (876bp) protein (292aa)
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW05_STRRD
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein {ECO:0000313|EMBL:ACZ84958.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_14
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16176..16931)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAI2_THECD
short-chain dehydrogenase/reductase SDR
3-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KHD76394.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_100_b1_sep16_scaffold_16_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16918..17715)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003774B86
alpha/beta superfamily-like protein
Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily)-like protein {ECO:0000313|EMBL:ACZ84960.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17715..18962)
DNA (1248bp) protein (416aa)
luciferase Tax=Nonomuraea coxensis RepID=UPI000372289F
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein {ECO:0000313|EMBL:ACZ84959.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_17
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19067..20026)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AUF9_NOCDD
Uncharacterized protein {ECO:0000313|EMBL:EWM66994.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_16_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20196..21353)
DNA (1158bp) protein (386aa)
Propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:ACY99510.1}; EC=2.3.1.176 {ECO:0000313|EMBL:ACY99510.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Propanoyl-CoA C-acyltransferase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE84_THECD
PLM1_100_b1_sep16_scaffold_16_19
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21353..22387)
DNA (1035bp) protein (345aa)
lipid-transfer protein Tax=Actinomadura atramentaria RepID=UPI000360F3F2
Lipid-transfer protein {ECO:0000313|EMBL:KIF03922.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
nonspecific lipid transfer protein
PLM1_100_b1_sep16_scaffold_16_20
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22413..22901)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Aeromicrobium marinum DSM 15272 RepID=E2SEL9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFQ82316.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_16_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22898..23368)
DNA (471bp) protein (157aa)
DNA-binding protein Tax=Actinomadura atramentaria RepID=UPI000377286D
DNA-binding protein {ECO:0000313|EMBL:ETK33606.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_16_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23365..24477)
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQC6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ84470.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_16_23
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24665..26299
DNA (1635bp) protein (545aa)
cholesterol oxidase (EC:1.1.3.6)
Cholesterol oxidase {ECO:0000313|EMBL:ABP55055.1}; EC=1.1.3.6 {ECO:0000313|EMBL:ABP55055.1};; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
cholesterol oxidase Tax=Salinispora tropica RepID=UPI00038118A9
PLM1_100_b1_sep16_scaffold_16_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(26349..27710)
DNA (1362bp) protein (454aa)
Pyridoxal-dependent decarboxylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TW0_SOLUE
pyridoxal-dependent decarboxylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM1_100_b1_sep16_scaffold_16_25
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27802..28239)
DNA (438bp) protein (146aa)
Coagulation factor 5/8 type domain protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6V7_CATAD
coagulation factor 5/8 type domain-containing protein
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:ACU75970.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_100_b1_sep16_scaffold_16_26
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28236..28844)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003751D2E
Uncharacterized protein {ECO:0000313|EMBL:EWM18370.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_16_27
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29036..29446)
DNA (411bp) protein (137aa)
glyoxalase Tax=Nocardiopsis baichengensis RepID=UPI0003496089
Putative dioxygenase of extradiol dioxygenase family {ECO:0000313|EMBL:KID30780.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
glyoxalase
PLM1_100_b1_sep16_scaffold_16_28
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29509..29769)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBR5_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88625.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_100_b1_sep16_scaffold_16_29
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29815..30708)
DNA (894bp) protein (298aa)
aminoglycoside phosphotransferase Tax=Streptomyces viridosporus RepID=UPI0002E69B33
Putative uncharacterized protein {ECO:0000313|EMBL:EFE70582.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_16_30
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30902..31141)
DNA (240bp) protein (80aa)
Putative monooxygenase yxeK Tax=Streptomyces davawensis JCM 4913 RepID=K4QW22_9ACTO
yxeK; Putative monooxygenase yxeK
Putative monooxygenase yxeK {ECO:0000313|EMBL:CCK25137.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
Displaying items 1-30 of 115 in total

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