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PLM1_100_b1_sep16_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_59_1
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(246..911)
DNA (666bp) protein (222aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Peptidase A24A domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WCE5_KINRD
peptidase A24A domain-containing protein
PLM1_100_b1_sep16_scaffold_59_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(908..1759)
DNA (852bp) protein (284aa)
Shikimate dehydrogenase substrate binding domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EXG81321.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
shikimate dehydrogenase substrate binding domain-containing protein
PLM1_100_b1_sep16_scaffold_59_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1784..2947)
DNA (1164bp) protein (388aa)
Putative aminodeoxychorismate lyase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HEL3_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:EXG81320.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative aminodeoxychorismate lyase
PLM1_100_b1_sep16_scaffold_59_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2944..3369)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
Putative Holliday junction resolvase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W913_ACTMD
Holliday junction resolvase YqgF
PLM1_100_b1_sep16_scaffold_59_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3384..6089)
DNA (2706bp) protein (902aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Alanine--tRNA ligase Tax=Micromonospora sp. (strain L5) RepID=E8S1X2_MICSL
alanyl-tRNA synthetase
PLM1_100_b1_sep16_scaffold_59_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6338..6610)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L168_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG81317.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_59_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6610..7059)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037458AE
Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain {ECO:0000313|EMBL:EXG81316.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_59_8
unknown

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comp(7134..7640)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_59_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7637..8974)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000371A1F7
AAA ATPase {ECO:0000313|EMBL:EXG81315.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Replication-associated recombination protein A
PLM1_100_b1_sep16_scaffold_59_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9191..11230
DNA (2040bp) protein (680aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034A087C
Putative RND superfamily drug exporter {ECO:0000313|EMBL:EXG81314.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_59_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11563..12567
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H9A9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44792.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_59_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12510..13010)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035EE44E
Uncharacterized protein {ECO:0000313|EMBL:KHD78392.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_59_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13007..14167)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWU4_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU77201.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_100_b1_sep16_scaffold_59_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14170..15954)
DNA (1785bp) protein (595aa)
Aspartate--tRNA ligase Tax=Micromonospora sp. (strain L5) RepID=E8S1W0_MICSL
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EXG81313.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
aspartyl-tRNA synthetase
PLM1_100_b1_sep16_scaffold_59_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15951..17210)
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Modestobacter marinus (strain BC501) RepID=I4EZE8_MODMB
PLM1_100_b1_sep16_scaffold_59_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17207..17923)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4MP92_9ACTO
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EXG81311.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hydrolase
PLM1_100_b1_sep16_scaffold_59_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18139..18999
DNA (861bp) protein (287aa)
Peptidyl-prolyl cis-trans isomerase B Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W951_9ACTO
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:EXG81310.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidyl-prolyl cis-trans isomerase B
PLM1_100_b1_sep16_scaffold_59_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19060..21774)
DNA (2715bp) protein (905aa)
PpGpp synthetase Tax=Actinoplanes sp. N902-109 RepID=R4LRF8_9ACTO
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:EXG81308.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
relA; ppGpp synthetase
PLM1_100_b1_sep16_scaffold_59_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21909..22463)
DNA (555bp) protein (185aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Adenine phosphoribosyltransferase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2I7_VERMA
PLM1_100_b1_sep16_scaffold_59_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22460..23596)
DNA (1137bp) protein (379aa)
Protein-export membrane protein SecF Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUR5_BLASD
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
secF; protein-export membrane protein secF
PLM1_100_b1_sep16_scaffold_59_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23599..25416)
DNA (1818bp) protein (606aa)
preprotein translocase subunit SecD Tax=Salinispora arenicola RepID=UPI00036AD933
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
protein-export membrane protein secd
PLM1_100_b1_sep16_scaffold_59_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25514..25933)
DNA (420bp) protein (140aa)
Preprotein translocase, YajC subunit Tax=Micromonospora RepID=D9T5N3_MICAI
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EXG81304.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
preprotein translocase subunit YajC
PLM1_100_b1_sep16_scaffold_59_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26078..27142)
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Micromonospora sp. ATCC 39149 RepID=C4RGT8_9ACTO
Holliday junction DNA helicase RuvB
PLM1_100_b1_sep16_scaffold_59_24
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27139..27741)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
Holliday junction ATP-dependent DNA helicase RuvA Tax=Salinispora arenicola (strain CNS-205) RepID=RUVA_SALAI
holliday junction DNA helicase ruva
PLM1_100_b1_sep16_scaffold_59_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27738..28313)
DNA (576bp) protein (192aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Streptomyces RepID=D6ALK9_STRFL
PLM1_100_b1_sep16_scaffold_59_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28419..29168)
DNA (750bp) protein (250aa)
transcriptional regulator Tax=Streptomyces chartreusis RepID=UPI000262FD5A
Probable transcriptional regulatory protein CryarDRAFT_2410 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative transcriptional regulatory protein
PLM1_100_b1_sep16_scaffold_59_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29207..29812)
DNA (606bp) protein (202aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Glutamine amidotransferase subunit PdxT Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W640_9ACTO
putative glutamine amidotransferase
PLM1_100_b1_sep16_scaffold_59_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29886..30812)
DNA (927bp) protein (309aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
pyridoxal biosynthesis lyase Tax=Actinopolymorpha alba RepID=UPI00035DDBE2
pyridoxal biosynthesis lyase pdxS
PLM1_100_b1_sep16_scaffold_59_29
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30871..31422)
DNA (552bp) protein (184aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036FB75E
Uncharacterized protein {ECO:0000313|EMBL:KHD76102.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_59_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31489..32667)
DNA (1179bp) protein (393aa)
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Phosphatidylinositol alpha-mannosyltransferase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S5S6_ACTS5
Glycosyltransferase {ECO:0000313|EMBL:EXG81296.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Displaying items 1-30 of 56 in total

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