ggKbase home page

PLM1_100_b1_sep16_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_138_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..557
DNA (555bp) protein (185aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI0003477919
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00108.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_138_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

539..1444
DNA (906bp) protein (302aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034DED27
ABC transporter permease component {ECO:0000313|EMBL:EWM16907.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1441..2253
DNA (813bp) protein (271aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000346320C
Multiple sugar transporter permease {ECO:0000313|EMBL:EWM16908.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2281..5277
DNA (2997bp) protein (999aa)
Alpha-mannosidase Tax=Saccharopolyspora erythraea RepID=T2S1Z3_SACER
Uncharacterized protein {ECO:0000313|EMBL:AHI00105.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5274..6257)
DNA (984bp) protein (328aa)
NAD binding oxidoreductase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HVW5_9PSEU
Oxidoreductase {ECO:0000313|EMBL:ETK31438.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
NAD binding oxidoreductase
PLM1_100_b1_sep16_scaffold_138_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6358..7566)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C74C5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86559.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_138_7
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7805..8785
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JR13_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY87221.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_100_b1_sep16_scaffold_138_8
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8808..10388)
DNA (1581bp) protein (527aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RKJ6_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA60352.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM1_100_b1_sep16_scaffold_138_9
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10583..10945)
DNA (363bp) protein (121aa)
Thioredoxin Tax=Frankia sp. CN3 RepID=G6H4Z9_9ACTO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
thioredoxin
PLM1_100_b1_sep16_scaffold_138_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11090..12124)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000368F67E
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66995.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_11
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12155..14041)
DNA (1887bp) protein (629aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036D3004
carbohydrate binding family 6
Carbohydrate binding family 6 {ECO:0000313|EMBL:ADI06810.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_100_b1_sep16_scaffold_138_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14630..16039)
DNA (1410bp) protein (470aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035CCFDA
peptidase S37 tripeptidyl aminopeptidase
Peptidase S37 tripeptidyl aminopeptidase {ECO:0000313|EMBL:AGZ41896.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_138_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16304..19252)
DNA (2949bp) protein (983aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0003810EED
Uncharacterized protein {ECO:0000313|EMBL:KJK50391.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_14
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19422..19853)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035E722C
Uncharacterized protein {ECO:0000313|EMBL:KGI83105.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
bifunctional DNA primase/polymerase
PLM1_100_b1_sep16_scaffold_138_15
unknown

Not on your lists

comp(19825..20094)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_138_16
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20055..20795)
DNA (741bp) protein (247aa)
N-superfamily bifunctional DNA primase/polymerase Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WEN3_9ACTO
DNA primase {ECO:0000313|EMBL:KJY40265.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
DNA primase
PLM1_100_b1_sep16_scaffold_138_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20892..21182
DNA (291bp) protein (97aa)
regulator Tax=Actinoplanes globisporus RepID=UPI00035C38CD
hypothetical protein
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61554.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_100_b1_sep16_scaffold_138_18
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21330..22208
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X6P2_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54542.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_138_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22235..23113)
DNA (879bp) protein (293aa)
membrane protein Tax=Amycolatopsis methanolica RepID=UPI0003749277
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00122.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_138_20
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23663..24247
DNA (585bp) protein (195aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002DE13F7
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADG87245.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_100_b1_sep16_scaffold_138_21
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24281..26344
DNA (2064bp) protein (688aa)
Serine protease, S9A family peptidase Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MVA7_SACVD
serine protease, S9A family peptidase
Serine protease, S9A family peptidase {ECO:0000313|EMBL:ACU97736.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM1_100_b1_sep16_scaffold_138_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26461..27660
DNA (1200bp) protein (400aa)
UPI00006C21E7 related cluster Tax=unknown RepID=UPI00006C21E7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM1_100_b1_sep16_scaffold_138_23
Acinetobacter sp. NIPH 3623, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27679..28407
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Acinetobacter baumannii RepID=V5VGM6_ACIBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENX39756.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 3623.;"
PLM1_100_b1_sep16_scaffold_138_24
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28388..28624)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JV18_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH29836.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_100_b1_sep16_scaffold_138_25
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28632..29984)
DNA (1353bp) protein (451aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I825_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD68696.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

30139..31419
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5R1_SPHTD
major facilitator superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_138_27
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31443..32318)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036D3B94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM09012.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM1_100_b1_sep16_scaffold_138_28
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32315..32689)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036B24B7
Uncharacterized protein {ECO:0000313|EMBL:CEL14768.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_138_29
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32924..33874
DNA (951bp) protein (317aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003682A37
ATP-dependent DNA ligase {ECO:0000313|EMBL:ETK31903.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
DNA polymerase LigD, polymerase domain-containing protein
PLM1_100_b1_sep16_scaffold_138_30
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33930..34493
DNA (564bp) protein (188aa)
hypothetical protein Tax=Streptomyces sp. SS RepID=UPI0002DADA3B
Isoprenylcysteine carboxyl methyltransferase family protein {ECO:0000313|EMBL:CCQ47214.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
protein-S-isoprenylcysteine methyltransferase
Displaying items 1-30 of 36 in total

View Taxonomy