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PLM1_100_b1_sep16_scaffold_231

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_231_1
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..1655
DNA (1653bp) protein (551aa)
Putative uncharacterized protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WMI0_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL27846.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_2
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1658..2326
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q326_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD39996.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_231_3
unknown

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2340..2462
DNA (123bp) protein (41aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_231_4
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2646..3977
DNA (1332bp) protein (444aa)
Predicted protein Tax=Streptomyces sp. C RepID=D9VW15_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK47723.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_5
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4035..5699)
DNA (1665bp) protein (555aa)
Phosphodiesterase/alkaline phosphatase D Tax=Rhodococcus sp. EsD8 RepID=N1ME98_9NOCA
Alkaline phosphatase {ECO:0000313|EMBL:KDE14127.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_6
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5739..6701)
DNA (963bp) protein (321aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI0003766424
NADPH:quinone reductase {ECO:0000313|EMBL:KDN18608.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
NADPH:quinone reductase and related Zn-dependent oxidoreductase
PLM1_100_b1_sep16_scaffold_231_7
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6927..8066
DNA (1140bp) protein (380aa)
Signal recognition particle receptor FtsY Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAJ4_VERMA
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_231_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8094..8882
DNA (789bp) protein (263aa)
Aminoglycoside phosphotransferase Tax=Micromonospora RepID=D9SXJ4_MICAI
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65527.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
aminoglycoside phosphotransferase
PLM1_100_b1_sep16_scaffold_231_9
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8886..9674)
DNA (789bp) protein (263aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4A4_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY99978.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_231_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9895..10395)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000361E79C
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62109.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10392..11210)
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T501_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL47811.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_231_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11207..12154)
DNA (948bp) protein (316aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L899_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61009.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12380..14044)
DNA (1665bp) protein (555aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000360B721
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ADB33992.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_231_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14251..15606
DNA (1356bp) protein (452aa)
Ammonium transporter Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEW7_ACTMD
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_100_b1_sep16_scaffold_231_15
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15603..15941
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEW6_ACTMD
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ACU39741.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_100_b1_sep16_scaffold_231_16
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15931..18135
DNA (2205bp) protein (735aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Actinoplanes sp. N902-109 RepID=R4LXL8_9ACTO
glnD; PII uridylyl-transferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_100_b1_sep16_scaffold_231_17
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18231..19760
DNA (1530bp) protein (510aa)
Signal recognition particle protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SJR3_ACTS5
ffh; signal recognition particle subunit SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_100_b1_sep16_scaffold_231_18
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19996..21048
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00035C2E83
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADL44943.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_231_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21094..22506
DNA (1413bp) protein (471aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Proline--tRNA ligase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAK1_VERMA
PLM1_100_b1_sep16_scaffold_231_20
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22587..23153
DNA (567bp) protein (189aa)
Putative uncharacterized protein Tax=Streptomyces griseoaurantiacus M045 RepID=F3NC47_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGG48935.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_231_21
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23234..24697
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000369C727
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49827.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_100_b1_sep16_scaffold_231_22
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24870..25319
DNA (450bp) protein (150aa)
30S ribosomal protein S16 Tax=Modestobacter marinus (strain BC501) RepID=I4F2E1_MODMB
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
rpsP; 30S ribosomal protein S16
PLM1_100_b1_sep16_scaffold_231_23
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25321..25557
DNA (237bp) protein (79aa)
UPF0109 protein MODMU_4419 Tax=Modestobacter marinus (strain BC501) RepID=I4F2E0_MODMB
transcription elongation factor
UPF0109 protein MODMU_4419 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_231_24
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25600..26109
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7A9_THEBD
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_100_b1_sep16_scaffold_231_25
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26106..26876
DNA (771bp) protein (257aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEV6_ACTMD
PLM1_100_b1_sep16_scaffold_231_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26988..27344
DNA (357bp) protein (119aa)
50S ribosomal protein L19 Tax=Modestobacter marinus (strain BC501) RepID=I4F2D6_MODMB
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_231_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27395..29599
DNA (2205bp) protein (735aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Signal peptidase i Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAK8_VERMA
signal peptidase i
Displaying 27 items

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