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PLM1_100_b1_sep16_scaffold_297

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_297_1
unknown

Not on your lists

3..74
DNA (72bp) protein (24aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_297_2
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101..541
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8P1C9_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS51376.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
polyketide cyclase/dehydrase
PLM1_100_b1_sep16_scaffold_297_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(721..1164)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2P511_9ACTO
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ACY98803.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_297_4
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1161..2969)
DNA (1809bp) protein (603aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037797DE
Alkaline phosphatase {ECO:0000313|EMBL:KJY36410.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
alkaline phosphatase
PLM1_100_b1_sep16_scaffold_297_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3038..5101)
DNA (2064bp) protein (688aa)
glycosyl transferase Tax=Frankia sp. BCU110501 RepID=UPI00035FE549
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ABW15836.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_297_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5118..6332)
DNA (1215bp) protein (405aa)
Glycosyl transferase family 2 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE7_PSEUX
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA27171.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_100_b1_sep16_scaffold_297_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6329..6781)
DNA (453bp) protein (151aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035D4193
Uncharacterized protein {ECO:0000313|EMBL:EXG80238.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_297_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6785..8287)
DNA (1503bp) protein (501aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Histidine kinase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3P9_THECD
histidine kinase
PLM1_100_b1_sep16_scaffold_297_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8284..8994)
DNA (711bp) protein (237aa)
Response regulator mprA Tax=Modestobacter marinus (strain BC501) RepID=I4F479_MODMB
mprA; response regulator mprA
Response regulator mprA {ECO:0000313|EMBL:CCH90442.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_297_10
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9121..10113
DNA (993bp) protein (331aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3K4_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42045.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_297_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10294..11883
DNA (1590bp) protein (530aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Micromonospora lupini str. Lupac 08 RepID=I0LED3_9ACTO
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CCH22180.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
subtilisin-like serine protease
PLM1_100_b1_sep16_scaffold_297_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11920..13287)
DNA (1368bp) protein (456aa)
pyridoxal-dependent decarboxylase (EC:4.1.1.-)
Pyridoxal-dependent decarboxylase family protein, putative Tax=Saccharopolyspora erythraea RepID=A4F5T3_SACEN
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EQD83480.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_100_b1_sep16_scaffold_297_13
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13369..14049)
DNA (681bp) protein (227aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
Putative endoglucanase Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4MYU5_KITSK
putative endoglucanase precursor
PLM1_100_b1_sep16_scaffold_297_14
unknown

Not on your lists

14253..14438
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_297_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14435..16609)
DNA (2175bp) protein (725aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000365C2BE
Alpha-L-fucosidase {ECO:0000313|EMBL:ETK32284.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alpha-L-fucosidase
PLM1_100_b1_sep16_scaffold_297_16
unknown

Not on your lists

16907..17104
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_297_17
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17150..20026
DNA (2877bp) protein (959aa)
Regulatory protein LuxR Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T7D7_MICAI
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ADL48129.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_297_18
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20087..20512)
DNA (426bp) protein (142aa)
Putative F420-dependent enzyme Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXD4_FRADG
Oxidoreductase {ECO:0000313|EMBL:KEP22514.1}; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
putative F420-dependent protein
PLM1_100_b1_sep16_scaffold_297_19
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20580..21287)
DNA (708bp) protein (236aa)
cyclic nucleotide-binding protein Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI00036D875F
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KJY17150.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_297_20
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21284..21649)
DNA (366bp) protein (122aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035DE2BC
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KJK59305.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
trxB2; thioredoxin reductase
PLM1_100_b1_sep16_scaffold_297_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21646..22149)
DNA (504bp) protein (168aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:ACZ86936.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ACZ86936.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein Tax=Streptomyces sp. FxanaC1 RepID=UPI000373024C
PLM1_100_b1_sep16_scaffold_297_22
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22175..22627)
DNA (453bp) protein (151aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003766067
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AII03328.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
PLM1_100_b1_sep16_scaffold_297_23
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22638..24716)
DNA (2079bp) protein (693aa)
ATP-dependent chaperone ClpB Tax=Saccharomonospora marina XMU15 RepID=H5WY96_9PSEU
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
ATPase AAA-2 domain-containing protein
PLM1_100_b1_sep16_scaffold_297_24
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24713..25267)
DNA (555bp) protein (185aa)
ATP-dependent chaperone ClpB Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T1S0_MICAI
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_297_25
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25270..25587)
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Streptomyces sp. AA4 RepID=D9VDG6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL10030.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_297_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25584..26198)
DNA (615bp) protein (205aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037C470F
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ETK35317.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
heat shock protein DnaJ domain-containing protein
Displaying 26 items

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