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PLM1_100_b1_sep16_scaffold_878

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_878_1
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..113
DNA (111bp) protein (37aa)
transposase IS1533 Tax=Micromonospora sp. CNB394 RepID=UPI000379B475
Mini-circle putative transposase for IS117
Mini-circle putative transposase for IS117 {ECO:0000313|EMBL:AEV86046.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_100_b1_sep16_scaffold_878_2
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(384..587)
DNA (204bp) protein (68aa)
Cold-shock protein Tax=Bacillus sp. EGD-AK10 RepID=U1YIR9_9BACI
Cold-shock protein {ECO:0000313|EMBL:EWT06492.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cold-shock DNA-binding domain-containing protein
PLM1_100_b1_sep16_scaffold_878_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(900..1961)
DNA (1062bp) protein (354aa)
Oxidoreductase, Gfo/Idh/MocA family Tax=Micromonospora lupini str. Lupac 08 RepID=I0L064_9ACTO
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:CCH17211.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Gfo/Idh/MocA family oxidoreductase
PLM1_100_b1_sep16_scaffold_878_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2025..2462
DNA (438bp) protein (146aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI0003650048
putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:AHK32724.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM1_100_b1_sep16_scaffold_878_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2491..4230
DNA (1740bp) protein (580aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000377D7FC
Putative ABC transporter {ECO:0000313|EMBL:CCH18382.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter
PLM1_100_b1_sep16_scaffold_878_6
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4307..4726
DNA (420bp) protein (140aa)
DoxX protein Tax=Streptomyces ipomoeae 91-03 RepID=L1L6A0_9ACTO
DoxX protein {ECO:0000313|EMBL:EKX68591.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_878_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4785..5732)
DNA (948bp) protein (316aa)
Aldo/keto reductase Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QID1_CATAD
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EXG80740.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
aldo/keto reductase
PLM1_100_b1_sep16_scaffold_878_8
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5790..7223)
DNA (1434bp) protein (478aa)
ATPase Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003681AA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW96300.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_100_b1_sep16_scaffold_878_9
unknown

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comp(7281..7460)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_878_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7697..9112
DNA (1416bp) protein (472aa)
Serine/threonine protein kinase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PP31_KRIFD
Serine/threonine protein kinase {ECO:0000313|EMBL:EXG79578.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
serine/threonine protein kinase
PLM1_100_b1_sep16_scaffold_878_11
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9399..10736
DNA (1338bp) protein (446aa)
ABC transporter Tax=Salinispora pacifica RepID=UPI000367737A
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABP52920.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_878_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10821..12545
DNA (1725bp) protein (575aa)
Butyrate--CoA ligase Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IZ94_9PSEU
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AHH94742.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_878_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12626..13108)
DNA (483bp) protein (161aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003726EFF
Uncharacterized protein {ECO:0000313|EMBL:CCH18811.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_878_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(13210..13455)
DNA (246bp) protein (82aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6G8_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96443.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_878_15
unknown

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13525..13683
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_878_16
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13805..15505
DNA (1701bp) protein (567aa)
Transcriptional regulator, LuxR family Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C1K1_BEUC1
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACQ81611.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 16 items

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