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PLM1_100_b1_sep16_scaffold_888

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_888_1
unknown

Not on your lists

280..408
DNA (129bp) protein (43aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_888_2
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(956..1216)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R653_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA56104.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM1_100_b1_sep16_scaffold_888_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1331..1762)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003710F5B
Uncharacterized protein {ECO:0000313|EMBL:ETK35585.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM1_100_b1_sep16_scaffold_888_4
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2292..2834)
DNA (543bp) protein (181aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000366A482
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86922.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_100_b1_sep16_scaffold_888_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3169..4266
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036E337A
two component system sensor kinase
Two component system sensor kinase {ECO:0000313|EMBL:AJE80735.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
PLM1_100_b1_sep16_scaffold_888_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4263..4931
DNA (669bp) protein (223aa)
LuxR family transcriptional regulator Tax=Actinomadura madurae LIID-AJ290 RepID=U2MG12_9ACTO
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB33337.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_888_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4988..5758
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCK4_STRRD
Uncharacterized protein {ECO:0000313|EMBL:KIH98010.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_888_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5773..6357
DNA (585bp) protein (195aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
2''''-5'''' RNA ligase Tax=Salinispora RepID=UPI0002DFF172
2'-5' RNA ligase
PLM1_100_b1_sep16_scaffold_888_9
unknown

Not on your lists

comp(6249..6515)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_888_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6817..7215)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LR09_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79633.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_888_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7408..7656
DNA (249bp) protein (83aa)
Heat shock protein Hsp20 Tax=Microbacterium laevaniformans OR221 RepID=H8E867_9MICO
Heat shock protein Hsp20 {ECO:0000313|EMBL:EIC06907.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
heat shock protein hsp20
PLM1_100_b1_sep16_scaffold_888_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7891..8208)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG80218.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_888_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8408..8833)
DNA (426bp) protein (142aa)
Anti-sigma factor antagonist Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6Y4_THECD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_888_14
unknown

Not on your lists

9178..9375
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_888_15
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10409..10933)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QDN7_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC42422.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM1_100_b1_sep16_scaffold_888_16
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10930..11148)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WP80_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:ETW24345.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_888_17
unknown

Not on your lists

comp(11504..11704)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_888_18
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11988..12341)
DNA (354bp) protein (118aa)
Phospholipid-binding protein, PBP family Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BK89_MYCCN
phospholipid-binding protein, PBP family
Phospholipid-binding protein, PBP family {ECO:0000313|EMBL:AFM17696.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_100_b1_sep16_scaffold_888_19
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13045..13563
DNA (519bp) protein (173aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
helicase Tax=Salinispora arenicola RepID=UPI00036BB5A0
recombinase D
PLM1_100_b1_sep16_scaffold_888_20
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13603..14415
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HGX8_9ACTO
S-adenosyl methyltransferase {ECO:0000313|EMBL:KJE22897.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_888_21
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14694..15080)
DNA (387bp) protein (129aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
DNA methylase Tax=Streptomyces sp. SS RepID=UPI0002FD4C21
SC7F9.37; DNA methylase
Displaying 21 items

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