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PLM1_100_b1_sep16_scaffold_1287

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1287_1
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(520..1257)
DNA (738bp) protein (246aa)
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8LFN3_FRASN
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABW12670.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_1287_2
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1641..2126
DNA (486bp) protein (162aa)
Possible regulator protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ09_9GAMM
Possible regulator protein {ECO:0000313|EMBL:EAR22164.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
cyclic nucleotide-binding protein
PLM1_100_b1_sep16_scaffold_1287_3
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2123..3616
DNA (1494bp) protein (498aa)
Putative secreted protein Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XQD7_LEEBM
Putative secreted protein {ECO:0000313|EMBL:EAQ48232.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217); (Flavobacterium sp. (strain MED217)).;"
cyclic nucleotide-binding protein
PLM1_100_b1_sep16_scaffold_1287_4
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4513..6210
DNA (1698bp) protein (566aa)
Protein serine phosphatase with GAF(S) sensor(S) Tax=Micromonospora sp. (strain L5) RepID=E8S0P2_MICSL
protein serine phosphatase with gaf(s) sensor(s)
LigA protein {ECO:0000313|EMBL:EWM64568.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_100_b1_sep16_scaffold_1287_5
unknown

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comp(6309..6533)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1287_6
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7148..7540)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000374CABB
Glyoxalase {ECO:0000313|EMBL:KIH96739.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_100_b1_sep16_scaffold_1287_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7537..8322)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037B62FD
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIH96743.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
arsR; ArsR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_1287_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8672..9100)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000367B64C
redox protein regulator of disulfide bond formation-like protein
Redox protein regulator of disulfide bond formation-like protein {ECO:0000313|EMBL:ACZ90571.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_1287_9
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9578..10177
DNA (600bp) protein (200aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037FF158
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY00159.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
PLM1_100_b1_sep16_scaffold_1287_10
unknown

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comp(10182..10559)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1287_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10790..10996)
DNA (207bp) protein (69aa)
ArsR family transcriptional regulator Tax=Demetria terragena RepID=UPI00037E5BED
MarR/EmrR family transcriptional regulator protein
Transcriptional regulator, MarR/EmrR family protein {ECO:0000313|EMBL:AEE46845.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
PLM1_100_b1_sep16_scaffold_1287_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11342..12010)
DNA (669bp) protein (223aa)
Type 12 methyltransferase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FC35_VERMA
type 12 methyltransferase
Type 12 methyltransferase {ECO:0000313|EMBL:AEB46033.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_1287_13
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12513..12632)
DNA (120bp) protein (40aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V0F6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB89303.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
Displaying 13 items

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