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PLM4_90_b1_sep16_scaffold_6281

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_6281_1
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(3..200)
DNA (198bp) protein (66aa)
TPR repeat bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_6281_2
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(283..3504)
DNA (3222bp) protein (1074aa)
Transcription-repair coupling factor bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mfd; transcription-repair coupling factor
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_6281_3
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

3759..4493
DNA (735bp) protein (245aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_6281_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(4514..4735)
DNA (222bp) protein (74aa)
hypothetical protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
PLM4_90_b1_sep16_scaffold_6281_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

4965..5669
DNA (705bp) protein (235aa)
hisC1; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_6281_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

5644..5997
DNA (354bp) protein (118aa)
Histidinol-phosphate aminotransferase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
histidinol-phosphate aminotransferase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_6281_7
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

6053..6706
DNA (654bp) protein (218aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
imidazoleglycerol-phosphate dehydratase bin=GWF2_Nitrospirae_44_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_6281_8
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

6697..7380
DNA (684bp) protein (228aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 bin=GWF2_Nitrospirae_44_13 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
HAD-superfamily hydrolase
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_6281_9
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

7377..8249
DNA (873bp) protein (291aa)
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyltransferase, putative bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_6281_10
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

8290..9210
DNA (921bp) protein (307aa)
Hypothetical membrane protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_6281_11
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

9461..9703
DNA (243bp) protein (81aa)
Probable potassium transport system protein kup Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=KUP_METAC
kup; potassium uptake protein Kup
Tax=RBG_13_Nitrospirae_43_8_curated
Displaying 11 items

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