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PLM4_90_b1_sep16_scaffold_680

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_680_1
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

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150..518
DNA (369bp) protein (123aa)
RNA polymerase sigma factor SigA Tax=Thermosipho africanus (strain TCF52B) RepID=B7ICM7_THEAB
RNA polymerase sigma factor RpoD
Tax=MPF_Thermotogae_50_1627
PLM4_90_b1_sep16_scaffold_680_2
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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737..1519
DNA (783bp) protein (261aa)
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_680_3
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

1636..2577
DNA (942bp) protein (314aa)
Corrinoid/iron-sulfur protein, small subunit bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
acetyl-CoA decarbonylase/synthase complex delta subunit
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_680_4
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

2674..3300
DNA (627bp) protein (209aa)
acetyl-CoA decarbonylase/synthase complex gamma subunit (EC:2.1.1.-)
Acetyl-CoA decarbonylase/synthase complex gamma subunit bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_680_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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3320..3973
DNA (654bp) protein (218aa)
acetyl-CoA decarbonylase/synthase complex gamma subunit (EC:2.1.1.-)
Acetyl-CoA decarbonylase/synthase complex gamma subunit bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_680_6
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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4065..6263
DNA (2199bp) protein (733aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit bin=GWF2_Nitrospirae_44_13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_90_b1_sep16_scaffold_680_7
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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6448..8433
DNA (1986bp) protein (662aa)
Carbon-monoxide dehydrogenase, catalytic subunit bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acetyl-CoA decarbonylase/synthase delta subunit
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_680_8
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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8450..8935
DNA (486bp) protein (162aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM91_9DELT
NADH-quinone oxidoreductase subunit E
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_680_9
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

8948..11275
DNA (2328bp) protein (776aa)
NADH dehydrogenase (Quinone) bin=GWB2_Nitrospirae_rel_47_37 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_680_10
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11474..13027
DNA (1554bp) protein (518aa)
NADH dehydrogenase (Quinone) bin=GWB2_Nitrospirae_rel_47_37 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_680_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

13458..14078
DNA (621bp) protein (207aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
4Fe-4S ferredoxin iron-sulfur binding domain protein bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_680_12
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

14106..16148
DNA (2043bp) protein (681aa)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_680_13
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

16463..16663
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGR1_THEYD
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_90_b1_sep16_scaffold_680_14
unknown

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16660..16725
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 14 items

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