ggKbase home page

PLM4_90_b1_sep16_scaffold_3452

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_3452_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003822027
family 2 glycosyl transferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_3452_2
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(551..961)
DNA (411bp) protein (137aa)
HEPN domain protein Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAP6_STAHD
Uncharacterized protein {ECO:0000313|EMBL:KFD41474.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
HEPN domain-containing protein
PLM4_90_b1_sep16_scaffold_3452_3
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(958..1452)
DNA (495bp) protein (165aa)
DNA polymerase beta domain protein region Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S255_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KFD41473.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
DNA polymerase subunit beta
PLM4_90_b1_sep16_scaffold_3452_4
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(1769..1909)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
PLM4_90_b1_sep16_scaffold_3452_5

Not on your lists

comp(2150..2578)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00036BCD65
Uncharacterized protein {ECO:0000313|EMBL:KKN60857.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_3452_6

Not on your lists

comp(2575..2841)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI0003681385
Uncharacterized protein {ECO:0000313|EMBL:KKN60858.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_3452_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3329..3739)
DNA (411bp) protein (137aa)
Pilus assembly protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SVG7_META2
pilus assembly protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_3452_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3736..4176)
DNA (441bp) protein (147aa)
Pilin (Bacterial filament) subfamily Tax=Methylophaga thiooxydans DMS010 RepID=C0N915_9GAMM
pilin family protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_3452_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4314..4757)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00035E38D3
pilus biogenesis protein TapA
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_3452_10
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5749..6261)
DNA (513bp) protein (171aa)
Putative nucleic acid-binding protein, contains PIN domain Tax=Metallosphaera yellowstonensis MK1 RepID=H2C100_9CREN
twitching mobility protein PilT
Tax=CG_Anaero_01
PLM4_90_b1_sep16_scaffold_3452_11
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6248..6493)
DNA (246bp) protein (82aa)
Tax=CG_Anaero_01
Displaying 11 items

View Taxonomy