ggKbase home page

PLM4_90_b1_sep16_scaffold_3697

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_3697_1
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(2..1618)
-----------------
DNA (1617bp)
protein (539aa)
Elongation factor 2 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF2_STAMF
fusA; elongation factor EF-2
Elongation factor 2 {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-2 {ECO:0000255|HAMAP-Rule:MF_00054};; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1).;"
PLM4_90_b1_sep16_scaffold_3697_2

Not on your lists

1759..2505
-----------------
DNA (747bp)
protein (249aa)
Putative serine/threonine protein kinase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLY2_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L00574 {ECO:0000313|EMBL:GAF84883.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ser/Thr protein kinase
PLM4_90_b1_sep16_scaffold_3697_3
unknown

Not on your lists

comp(2502..2729)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_3697_4
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2795..3472)
-----------------
DNA (678bp)
protein (226aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1I2_METPS
purP-3; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
PLM4_90_b1_sep16_scaffold_3697_5
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3433..3861)
-----------------
DNA (429bp)
protein (143aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1I2_METPS
purP-3; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
PLM4_90_b1_sep16_scaffold_3697_6
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3858..4961)
-----------------
DNA (1104bp)
protein (368aa)
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1I1_METPS
purP-2; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000313|EMBL:BAI62553.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
Displaying 6 items

View Taxonomy