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PLM4_90_b1_sep16_scaffold_58163

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_58163_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3..659
-----------------
DNA (657bp)
protein (219aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2T1_9ARCH
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_58163_trna_1
unknown

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comp(681..786)
-----------------
DNA (106bp)
transferRNA Ser
PLM4_90_b1_sep16_scaffold_58163_2
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(858..1202)
-----------------
DNA (345bp)
protein (115aa)
Putative ribosomal RNA small subunit methyltransferase C Tax=Pyrococcus sp. ST04 RepID=I3RFU3_9EURY
ribosomal RNA small subunit methyltransferase C
Putative ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:AFK23103.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
PLM4_90_b1_sep16_scaffold_58163_3
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(1147..1416)
-----------------
DNA (270bp)
protein (90aa)
16S rRNA m(2)G 1207 methyltransferase (EC:2.1.1.171) bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
methyltransferase small
Tax=RBG_16_Bathyarchaeota_57_9_curated
PLM4_90_b1_sep16_scaffold_58163_4
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1400..2182)
-----------------
DNA (783bp)
protein (261aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
Probable tRNA pseudouridine synthase B Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLT5_METZD
rRNA pseudouridine synthase
PLM4_90_b1_sep16_scaffold_58163_5
unknown

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comp(2200..2268)
-----------------
DNA (69bp)
protein (23aa)

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Displaying 6 items

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