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PLM1_100_coex_sep16_scaffold_396

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_396_1
unknown

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3..1112
DNA (1110bp) protein (370aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_396_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1128..2672
DNA (1545bp) protein (515aa)
Response regulator receiver modulated metal dependent phosphohydrolase bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator receiver modulated metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_396_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2669..3046
DNA (378bp) protein (126aa)
Sporulation initiation phosphotransferase F (Stage 0 sporulation protein F) bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CheY-like receiver
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_396_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3113..3862
DNA (750bp) protein (250aa)
Methyltransferase type 11 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_396_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3944..4678
DNA (735bp) protein (245aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] bin=bin7_NC10_sister species=Nocardiopsis halophila genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_396_6
unknown

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5202..5576
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_396_7
unknown

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5591..5713
DNA (123bp) protein (41aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_396_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5719..6390
DNA (672bp) protein (224aa)
acetyltransferase bin=bin7_NC10_sister species=Paenibacillus polymyxa genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyltransferase, ribosomal protein N-acetylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_396_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6377..8515
DNA (2139bp) protein (713aa)
putative two-component hybrid sensor and regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin7_NC10_sister organism_group=NC10
Sensor protein resE
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_396_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8533..11223
DNA (2691bp) protein (897aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_396_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(11320..12300)
DNA (981bp) protein (327aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_396_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(12297..13226)
DNA (930bp) protein (310aa)
fbaB; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase class I bin=GWA2_Methylomirabilis_73_35 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_396_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13247..13918)
DNA (672bp) protein (224aa)
cbbF; D-fructose-1,6-bisphosphatase protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000313|EMBL:CBE69213.1};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Fructose-1,6-bisphosphatase class 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHI1_9BACT
PLM1_100_coex_sep16_scaffold_396_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13915..16548)
DNA (2634bp) protein (878aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_396_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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16723..17691
DNA (969bp) protein (323aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_396_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17673..18281
DNA (609bp) protein (203aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_396_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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18308..19744
DNA (1437bp) protein (479aa)
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 17 items

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