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PLM1_100_coex_sep16_scaffold_482

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_482_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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80..1465
DNA (1386bp) protein (462aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_482_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1767..2993
DNA (1227bp) protein (409aa)
id=4736661 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_482_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2990..5647)
DNA (2658bp) protein (886aa)
Lytic transglycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_482_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5647..8178)
DNA (2532bp) protein (844aa)
uridylyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UTP-GlnB uridylyltransferase, GlnD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8317..9399
DNA (1083bp) protein (361aa)
hisC4; histidinol-phosphate transaminase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9410..9862
DNA (453bp) protein (151aa)
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9864..10769
DNA (906bp) protein (302aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11047..11640
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGT4_9BACT
Protein tonB2
Uncharacterized protein {ECO:0000313|EMBL:CBE68965.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM1_100_coex_sep16_scaffold_482_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11637..11945)
DNA (309bp) protein (103aa)
id=14625964 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_482_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12019..12546
DNA (528bp) protein (176aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_482_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12559..13668
DNA (1110bp) protein (370aa)
id=4698146 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13777..14727
DNA (951bp) protein (317aa)
L-aminopeptidase/D-esterase bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S58, DmpA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14798..16093)
DNA (1296bp) protein (432aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_482_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16142..16420
DNA (279bp) protein (93aa)
id=14628098 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_482_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16417..17337)
DNA (921bp) protein (307aa)
Peptidase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M28
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_482_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17345..18124)
DNA (780bp) protein (260aa)
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
magnesium-dependent deoxyribonuclease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_482_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18121..18444)
DNA (324bp) protein (108aa)
hypothetical protein bin=bin7_NC10_sister species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Membrane protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 17 items

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