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PLM1_100_coex_sep16_scaffold_569

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_569_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..870
DNA (870bp) protein (290aa)
hypothetical protein MkanA1_05815 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_569_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

867..1145
DNA (279bp) protein (93aa)
Selenoprotein bin=GWC2_Methylomirabilis_70_24 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenoprotein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_569_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1167..1385
DNA (219bp) protein (73aa)
Selenoprotein bin=GWA2_Methylomirabilis_73_35 species=Roseobacter sp. GAI101 genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
selenoprotein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_569_4
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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1399..3159
DNA (1761bp) protein (587aa)
Sodium/hydrogen exchanger Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL11_SYNFM
sodium/hydrogen exchanger
Tax=GWF2_Elusimicrobia_62_30_curated
PLM1_100_coex_sep16_scaffold_569_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3182..3688)
DNA (507bp) protein (169aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_569_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3691..4908)
DNA (1218bp) protein (406aa)
Putative lipid-transfer protein bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_569_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5069..7840)
DNA (2772bp) protein (924aa)
Excinuclease ABC, subunit A bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uvrA; excinuclease ABC subunit A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7966..8448
DNA (483bp) protein (161aa)
Transcriptional regulator, Fur family bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferric uptake regulator, Fur family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8435..8773
DNA (339bp) protein (113aa)
Rubrerythrin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbr; rubrerythrin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8766..10058
DNA (1293bp) protein (431aa)
glpC; ferredoxin bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_569_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10055..10636
DNA (582bp) protein (194aa)
hypothetical protein bin=bin7_NC10_sister species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10633..10953
DNA (321bp) protein (107aa)
lipoprotein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11015..11761)
DNA (747bp) protein (249aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_569_14
Harpegnathos saltator, Harpegnathos, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(11791..12072)
DNA (282bp) protein (94aa)
PREDICTED: calsequestrin-1-like Tax=Maylandia zebra RepID=UPI00032979E2
Serine/threonine-protein kinase DCLK2 {ECO:0000313|EMBL:EFN87506.1}; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Ponerinae; Ponerini; Harpegnathos.;" source="Harpegnathos saltator (Jerdon's jumping ant).;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_569_15
unknown

Not on your lists

12359..12739
DNA (381bp) protein (127aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_569_16
unknown

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comp(12901..13332)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_569_trna_1
unknown

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13560..13631
DNA (72bp)
transferRNA Met
PLM1_100_coex_sep16_scaffold_569_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14394..15179
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/isomerase bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_569_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15192..16250
DNA (1059bp) protein (353aa)
Glycosyl transferase, group 1 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16247..16654
DNA (408bp) protein (136aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative 6-pyruvoyl tetrahydropterin synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16683..17069
DNA (387bp) protein (129aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase bin=GWA2_Methylomirabilis_73_35 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_569_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17069..17644
DNA (576bp) protein (192aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
folE; GTP cyclohydrolase I (EC:3.5.4.16)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_569_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17641..18363
DNA (723bp) protein (241aa)
GTP cyclohydrolase I bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_569_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

18410..18736
DNA (327bp) protein (109aa)
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster assembly accessory protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_569_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18745..18996
DNA (252bp) protein (84aa)
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
sulfur carrier protein ThiS
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 25 items

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