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PLM1_100_coex_sep16_scaffold_2062

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2062_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2..346)
DNA (345bp) protein (115aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_2062_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(357..2006)
DNA (1650bp) protein (550aa)
MscS Mechanosensitive ion channel Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEP9_9BACT
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CBE68228.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM1_100_coex_sep16_scaffold_2062_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2088..5036
DNA (2949bp) protein (983aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2062_4
CSP1_5_NC10, NC10, Bacteria

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comp(5041..5319)
DNA (279bp) protein (93aa)
transmembrane_regions 7..24 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM1_100_coex_sep16_scaffold_2062_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5316..5588)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R4Z3_CUPTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2062_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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5653..6156
DNA (504bp) protein (168aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2062_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6178..6327)
DNA (150bp) protein (50aa)
Deoxyhypusine synthase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2062_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6291..7205)
DNA (915bp) protein (305aa)
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2062_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7237..7773
DNA (537bp) protein (179aa)
Predicted methyltransferase (UbiE/COQ5 family) bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2062_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7716..8003
DNA (288bp) protein (96aa)
Predicted methyltransferase (UbiE/COQ5 family) bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2062_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7988..8956)
DNA (969bp) protein (323aa)
Adenylate and Guanylate cyclase catalytic domain protein Tax=delta proteobacterium NaphS2 RepID=D8EWW8_9DELT
family 3 adenylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 11 items

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