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PLM1_100_coex_sep16_scaffold_11575

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_11575_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..211
DNA (210bp) protein (70aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_11575_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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208..687
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_11575_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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770..2017
DNA (1248bp) protein (416aa)
Cysteine--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cysS; cysteinyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_11575_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2096..2848
DNA (753bp) protein (251aa)
rRNA methyltransferase bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rRNA methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_11575_trna_1
unknown

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2888..2959
DNA (72bp)
transferRNA Thr
PLM1_100_coex_sep16_scaffold_11575_trna_2
unknown

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3020..3102
DNA (83bp)
transferRNA Tyr
PLM1_100_coex_sep16_scaffold_11575_trna_3
unknown

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3211..3282
DNA (72bp)
transferRNA Gly
PLM1_100_coex_sep16_scaffold_11575_trna_4
unknown

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3357..3429
DNA (73bp)
transferRNA Thr
PLM1_100_coex_sep16_scaffold_11575_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3481..3672
DNA (192bp) protein (64aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
Displaying 9 items

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