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PLM1_100_coex_sep16_scaffold_1034

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1034_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2..1228)
DNA (1227bp) protein (409aa)
Tetratricopeptide repeat family protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1034_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1225..1695)
DNA (471bp) protein (157aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1034_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1768..3126
DNA (1359bp) protein (453aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1034_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3123..4040
DNA (918bp) protein (306aa)
Dipeptide transport system permease DppB bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppB; dipeptide transport system permease DppB
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1034_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4403..4957
DNA (555bp) protein (185aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiD; Oligopeptide ABC transporter permease protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1034_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5135..6829
DNA (1695bp) protein (565aa)
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP26_KORVE
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:ABF41374.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM1_100_coex_sep16_scaffold_1034_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6829..7458
DNA (630bp) protein (210aa)
Siroheme synthase bin=GWF2_Methylomirabilis_70_14 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrin-III C-methyltransferase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1034_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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7455..8276
DNA (822bp) protein (274aa)
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1034_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(8243..8794)
DNA (552bp) protein (184aa)
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
VanZ family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1034_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8857..11205
DNA (2349bp) protein (783aa)
Dead/deah box helicase bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DEAD/DEAH box helicase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1034_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11212..12156
DNA (945bp) protein (315aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 11 items

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