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PLM1_100_coex_sep16_scaffold_1062

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1062_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..124)
DNA (123bp) protein (41aa)
Amidohydrolase 2 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1062_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(138..1031)
DNA (894bp) protein (298aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1062_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1043..2599)
DNA (1557bp) protein (519aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1062_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2770..4632
DNA (1863bp) protein (621aa)
Metal dependent phosphohydrolase bin=GWA2_Methylomirabilis_73_35 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1062_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4804..5019)
DNA (216bp) protein (72aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1062_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5030..5668)
DNA (639bp) protein (213aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1062_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5799..6269)
DNA (471bp) protein (157aa)
Sec-independent protein translocase protein TatA bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. RS9917 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative twin-arginine translocation protein TatB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1062_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6443..7423)
DNA (981bp) protein (327aa)
two component, sigma54 specific, Fis family transcriptional regulator bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
two component sigma-54 specific Fis family transcriptional regulator
Tax=CSP1_6_Rokubacteria
Displaying 8 items

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