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PLM1_100_coex_sep16_scaffold_1472

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1472_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..167
DNA (165bp) protein (55aa)
CTP synthase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyrG; CTP synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1472_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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308..1150
DNA (843bp) protein (281aa)
2-dehydro-3-deoxyphosphooctonate aldolase bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-dehydro-3-deoxyphosphooctonate aldolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1472_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1147..2160
DNA (1014bp) protein (338aa)
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1472_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2251..2802
DNA (552bp) protein (184aa)
Hypothetical membrane protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1472_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2799..3965
DNA (1167bp) protein (389aa)
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lipopolysaccharide transport periplasmic protein LptA
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1472_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3970..4692
DNA (723bp) protein (241aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1472_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4717..6174
DNA (1458bp) protein (486aa)
RNA polymerase sigma-54 factor bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma 54 subunit RpoN
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 7 items

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