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PLM1_100_coex_sep16_scaffold_1521

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1521_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1521_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(191..1165)
DNA (975bp) protein (325aa)
Oxidoreductase domain protein bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1521_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1172..1909)
DNA (738bp) protein (246aa)
Glycosyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1521_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1902..2495)
DNA (594bp) protein (198aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1521_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2492..2767)
DNA (276bp) protein (92aa)
hypothetical protein bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1521_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2767..3015)
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1521_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3081..4544)
DNA (1464bp) protein (488aa)
Integral membrane sensor signal transduction histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
kdpD; Osmosensitive K+ channel sensor histidine kinase (two-component system with KdpE)
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1521_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4553..5404)
DNA (852bp) protein (284aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1521_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5349..5996)
DNA (648bp) protein (216aa)
Diguanylate cyclase with PAS/PAC sensor bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1521_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5981..6091)
DNA (111bp) protein (37aa)
Two component transcriptional regulator, winged helix family bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

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