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PLM0_60_b1_sep16_scaffold_4488

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_4488_1
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..308
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JB21_9BURK
hypothetical protein
Tax=CG_Desulfovib_01
PLM0_60_b1_sep16_scaffold_4488_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(664..2811)
DNA (2148bp) protein (716aa)
TonB-dependent outer membrane transport protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ3_GEMAT
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89336.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2882..3943)
DNA (1062bp) protein (354aa)
Putative anti-sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ4_GEMAT
FecR protein
FecR protein {ECO:0000313|EMBL:AHG88340.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3980..4552
DNA (573bp) protein (191aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89338.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4637..5581
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ6_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_4488_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5728..6417
DNA (690bp) protein (230aa)
Intradiol ring-cleavage dioxygenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGH7_THET1
intradiol ring-cleavage dioxygenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_4488_7
unknown

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comp(6638..6988)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_4488_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7099..8646)
DNA (1548bp) protein (516aa)
dacC; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAH37555.1}; EC=3.4.16.4 {ECO:0000313|EMBL:BAH37555.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
D-alanyl-D-alanine carboxypeptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P5_GEMAT
PLM0_60_b1_sep16_scaffold_4488_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8828..9328
DNA (501bp) protein (167aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89941.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9325..10158)
DNA (834bp) protein (278aa)
Putative CtaG protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P0_GEMAT
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AHG89948.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10160..10528)
DNA (369bp) protein (123aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N9_GEMAT
cytochrome C oxidase subunit IV
Cytochrome C oxidase subunit IV {ECO:0000313|EMBL:AHG89947.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_4488_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10539..11228)
DNA (690bp) protein (230aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:BAH37548.1}; EC=1.9.3.1 {ECO:0000313|EMBL:BAH37548.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cytochrome c oxidase subunit III Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N8_GEMAT
PLM0_60_b1_sep16_scaffold_4488_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11344..12870)
DNA (1527bp) protein (509aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:BAH37547.1}; EC=1.9.3.1 {ECO:0000313|EMBL:BAH37547.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cytochrome c oxidase subunit I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N7_GEMAT
Displaying 13 items

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