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PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

PLM0_60cm_b1_sep2016_Gemmatimonadetes_61_15
In projects: PLM0_60cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  gemmatimonadetes_ggkbase

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Displaying items 51-100 of 244 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM0_60_b1_sep16_scaffold_13864
Species: Gemmatimonas aurantiaca (50%)
2 3206 bp 61.85 16.19 87.59
PLM0_60_b1_sep16_scaffold_580
Domain: Bacteria (71.43%)
14 16781 bp 59.19 16.16 85.31
PLM0_60_b1_sep16_scaffold_2390
Species: Gemmatimonadetes bacterium KBS708 (62.5%)
8 8171 bp 61.44 16.12 96.27
PLM0_60_b1_sep16_scaffold_1940
Species: Gemmatimonadetes bacterium KBS708 (55.56%)
9 10920 bp 60.83 16.10 97.86
PLM0_60_b1_sep16_scaffold_3087
Species: Gemmatimonadetes bacterium KBS708 (55.56%)
9 7164 bp 60.36 16.10 98.24
PLM0_60_b1_sep16_scaffold_2481
Domain: Bacteria (88.89%)
9 8030 bp 61.36 16.06 98.11
PLM0_60_b1_sep16_scaffold_1510
Domain: Bacteria (75%)
16 16322 bp 60.23 16.00 85.04
PLM0_60_b1_sep16_scaffold_6614
Species: Gemmatimonadetes bacterium KBS708 (75%)
4 4754 bp 60.29 15.97 91.57
PLM0_60_b1_sep16_scaffold_5720
Species: Gemmatimonadetes bacterium KBS708 (50%)
8 5129 bp 61.01 15.94 91.36
PLM0_60_b1_sep16_scaffold_900
Species: Gemmatimonadetes bacterium KBS708 (87.5%)
24 21105 bp 61.36 15.88 96.38
PLM0_60_b1_sep16_scaffold_2303
Class: Gemmatimonadetes (57.14%)
7 8336 bp 61.14 15.83 97.38
PLM0_60_b1_sep16_scaffold_3124
Species: Gemmatimonadetes bacterium KBS708 (50%)
6 7127 bp 61.96 15.83 95.47
PLM0_60_b1_sep16_scaffold_20761
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 2577 bp 62.28 15.83 96.62
PLM0_60_b1_sep16_scaffold_1464
Domain: Bacteria (87.5%)
8 10550 bp 61.42 15.82 91.73
PLM0_60_b1_sep16_scaffold_3526
Species: Gemmatimonadetes bacterium KBS708 (70%)
10 6678 bp 61.81 15.81 94.28
PLM0_60_b1_sep16_scaffold_3391
Species: Gemmatimonadetes bacterium KBS708 (100%)
8 8046 bp 61.21 15.81 83.07
PLM0_60_b1_sep16_scaffold_21689
Class: Gemmatimonadetes (50%)
4 2516 bp 60.45 15.80 90.38
PLM0_60_b1_sep16_scaffold_1118
Species: Gemmatimonadetes bacterium KBS708 (56.52%)
23 20246 bp 61.76 15.77 87.11
PLM0_60_b1_sep16_scaffold_5067
Class: Gemmatimonadetes (75%)
12 11126 bp 61.23 15.76 86.88
PLM0_60_b1_sep16_scaffold_18836
Species: Gemmatimonadetes bacterium KBS708 (60%)
10 7512 bp 60.57 15.73 88.74
PLM0_60_b1_sep16_scaffold_679
Species: Gemmatimonadetes bacterium KBS708 (61.11%)
18 18068 bp 61.24 15.72 90.59
PLM0_60_b1_sep16_scaffold_4138
Species: Gemmatimonadetes bacterium KBS708 (72.22%)
18 11734 bp 61.33 15.69 94.95
PLM0_60_b1_sep16_scaffold_10678
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
6 3683 bp 60.71 15.68 78.69
PLM0_60_b1_sep16_scaffold_1747
Species: Gemmatimonadetes bacterium KBS708 (64.29%)
14 12513 bp 60.68 15.66 89.86
PLM0_60_b1_sep16_scaffold_9057
Domain: Bacteria (100%)
11 14620 bp 59.93 15.65 93.00
PLM0_60_b1_sep16_scaffold_6405
Species: Gemmatimonadetes bacterium KBS708 (60%)
5 4833 bp 62.78 15.64 94.66
PLM0_60_b1_sep16_scaffold_2121
Species: Gemmatimonadetes bacterium KBS708 (50%)
10 10982 bp 60.73 15.64 89.11
PLM0_60_b1_sep16_scaffold_4488
Class: Gemmatimonadetes (69.23%)
13 12872 bp 60.67 15.62 89.68
PLM0_60_b1_sep16_scaffold_14136
Domain: Bacteria (80%)
5 4826 bp 59.76 15.60 86.97
PLM0_60_b1_sep16_scaffold_367
Class: Gemmatimonadetes (68.18%)
22 21594 bp 59.65 15.52 98.39
PLM0_60_b1_sep16_scaffold_806
Species: Gemmatimonadetes bacterium KBS708 (61.9%)
21 24434 bp 61.22 15.48 90.24
PLM0_60_b1_sep16_scaffold_2989
Species: Gemmatimonadetes bacterium KBS708 (60%)
15 7292 bp 60.68 15.47 97.01
PLM0_60_b1_sep16_scaffold_2004
Phylum: Proteobacteria (50%)
8 8969 bp 59.77 15.47 93.15
PLM0_60_b1_sep16_scaffold_4972
Species: Gemmatimonadetes bacterium KBS708 (75%)
4 5543 bp 60.91 15.45 94.77
PLM0_60_b1_sep16_scaffold_3553
Species: Gemmatimonadetes bacterium KBS708 (81.82%)
11 12878 bp 63.18 15.44 97.61
PLM0_60_b1_sep16_scaffold_10003
Domain: Bacteria (100%)
9 5552 bp 61.33 15.43 90.08
PLM0_60_b1_sep16_scaffold_548
Species: Gemmatimonadetes bacterium KBS708 (63.64%)
22 23725 bp 62.16 15.39 93.10
PLM0_60_b1_sep16_scaffold_20978 4 2563 bp 60.09 15.39 83.93
PLM0_60_b1_sep16_scaffold_2209
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
9 12988 bp 61.00 15.37 99.72
PLM0_60_b1_sep16_scaffold_18221
Class: Gemmatimonadetes (50%)
4 2764 bp 60.09 15.36 97.14
PLM0_60_b1_sep16_scaffold_18050
Species: Gemmatimonadetes bacterium KBS708 (60%)
5 3476 bp 61.68 15.36 86.39
PLM0_60_b1_sep16_scaffold_1955
Species: Gemmatimonadetes bacterium KBS708 (52.94%)
17 14868 bp 61.25 15.35 95.98
PLM0_60_b1_sep16_scaffold_1527
Domain: Bacteria (65.22%)
23 22226 bp 60.55 15.35 87.56
PLM0_60_b1_sep16_scaffold_441
Species: Gemmatimonadetes bacterium KBS708 (70.59%)
17 19605 bp 62.41 15.35 94.01
PLM0_60_b1_sep16_scaffold_5119
Domain: Bacteria (100%)
5 5448 bp 59.38 15.34 91.96
PLM0_60_b1_sep16_scaffold_2459
Species: Gemmatimonadetes bacterium KBS708 (50%)
12 12904 bp 61.71 15.32 85.28
PLM0_60_b1_sep16_scaffold_364
Species: Gemmatimonadetes bacterium KBS708 (51.28%)
39 40169 bp 61.20 15.28 93.83
PLM0_60_b1_sep16_scaffold_882
Phylum: Gemmatimonadetes (50%)
34 33620 bp 60.96 15.28 92.65
PLM0_60_b1_sep16_scaffold_2136
Species: Gemmatimonadetes bacterium KBS708 (76.92%)
13 15135 bp 61.15 15.26 96.77
PLM0_60_b1_sep16_scaffold_5964
Species: Gemmatimonadetes bacterium KBS708 (55.56%)
9 6645 bp 60.51 15.26 90.20
Displaying items 51-100 of 244 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.