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PLM3_60_b1_sep16_scaffold_8911

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_8911_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

117..860
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCQ0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(970..1812)
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCP9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41008.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8911_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2064..2459)
DNA (396bp) protein (132aa)
Putative Cytochrome c Tax=Candidatus Nitrospira defluvii RepID=D8PCP8_9BACT
putative cytochrome c
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_4
unknown

Not on your lists

comp(2481..2627)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8911_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2664..3347)
DNA (684bp) protein (228aa)
queC; queuosine biosynthesis protein queC (EC:3.5.-.-)
7-cyano-7-deazaguanine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PCP6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3492..3857)
DNA (366bp) protein (122aa)
DnaK suppressor protein (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PCP5_9BACT
dksA; DnaK suppressor protein
DnaK suppressor protein (Modular protein) {ECO:0000313|EMBL:CBK41004.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8911_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3972..4487)
DNA (516bp) protein (172aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
adenine phosphoribosyltransferase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ABC1
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4502..5461)
DNA (960bp) protein (320aa)
RNA polymerase sigma factor Tax=Candidatus Nitrospira defluvii RepID=D8PCP3_9BACT
rpoS; RNA polymerase, sigma S (sigma 38) factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8911_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5494..5775)
DNA (282bp) protein (94aa)
hypothetical protein Tax=unclassified candidate division pSL4 RepID=UPI0003634384
acylphosphatase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_trna_1
unknown

Not on your lists

comp(6015..6088)
DNA (74bp)
transferRNA Pro
PLM3_60_b1_sep16_scaffold_8911_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6213..7244)
DNA (1032bp) protein (344aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PCP1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7455..7865
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCP0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7885..8226
DNA (342bp) protein (114aa)
Putative [2Fe-2S] ferredoxin Tax=Candidatus Nitrospira defluvii RepID=D8PCN9_9BACT
putative [2Fe-2S] ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8239..8652
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCN8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8911_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8665..8943
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCN7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40996.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8911_15
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9299..9892)
DNA (594bp) protein (198aa)
Tax=RBG_16_Deltaproteobacteria_44_11_curated
PLM3_60_b1_sep16_scaffold_8911_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9894..10196)
DNA (303bp) protein (101aa)
squalene synthase (EC:2.5.1.21)
Squalene synthase {ECO:0000313|EMBL:CBK40994.1}; EC=2.5.1.21 {ECO:0000313|EMBL:CBK40994.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Squalene synthase Tax=Candidatus Nitrospira defluvii RepID=D8PCN5_9BACT
Displaying 17 items

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