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PLM3_60_b1_sep16_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_90_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..1211
DNA (1209bp) protein (403aa)
Glycosyl transferase, group 1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XK3_SOLUE
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABJ85612.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_90_2

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1186..2289
DNA (1104bp) protein (368aa)
Putative Glycosyl transferase, group 1 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Marine sediment metagenome DNA, contig: S01H1_L00695 {ECO:0000313|EMBL:GAF68842.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative glycosyl transferase, group 1
PLM3_60_b1_sep16_scaffold_90_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2972..3430)
DNA (459bp) protein (153aa)
Glycosyl transferase family 2 bin=GWF2_Ignavibacteria_35_20 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
family 2 glycosyl transferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3_60_b1_sep16_scaffold_90_4

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comp(4475..5272)
DNA (798bp) protein (266aa)
Marine sediment metagenome DNA, contig: S01H1_L00695 {ECO:0000313|EMBL:GAF68842.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative Glycosyl transferase, group 1 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative glycosyl transferase, group 1
PLM3_60_b1_sep16_scaffold_90_5
unknown

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5315..5407
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_90_6
unknown

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5404..5619
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_90_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(5746..7671)
DNA (1926bp) protein (642aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBA1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40510.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_90_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7661..8800)
DNA (1140bp) protein (380aa)
Glycosyl transferase, group 1 bin=GWF2_Ignavibacteria_35_20 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycosyl transferase, group 1
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3_60_b1_sep16_scaffold_90_9
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(8852..10336)
DNA (1485bp) protein (495aa)
Polysaccharide biosynthesis protein Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E4B3_METRM
polysaccharide biosynthesis protein
Tax=RBG_16_Chloroflexi_50_9_curated
PLM3_60_b1_sep16_scaffold_90_10
unknown

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comp(10434..10556)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_90_11
unknown

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10756..11040
DNA (285bp) protein (95aa)
integrase
PLM3_60_b1_sep16_scaffold_90_trna_1
unknown

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comp(10784..10855)
DNA (72bp)
transferRNA Gly
PLM3_60_b1_sep16_scaffold_90_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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11706..15143
DNA (3438bp) protein (1146aa)
nxrA2; putative nitrate oxidoreductase subunit alpha (EC:1.7.99.4)
Putative Nitrate oxidoreductase, alpha subunit {ECO:0000313|EMBL:CBK42946.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CBK42946.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Nitrate oxidoreductase, alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PI59_9BACT
PLM3_60_b1_sep16_scaffold_90_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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15190..16479
DNA (1290bp) protein (430aa)
nxrB2; putative nitrate oxidoreductase subunit beta (EC:1.7.99.4)
Putative Nitrate oxidoreductase, beta subunit {ECO:0000313|EMBL:CBK42927.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CBK42927.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Nitrate oxidoreductase, beta subunit Tax=Bacteria RepID=D8PI40_9BACT
PLM3_60_b1_sep16_scaffold_90_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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16730..17056
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA54_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17139..17507
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA53_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40112.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_90_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17603..17833
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA52_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40111.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_90_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(18419..18709)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA51_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_90_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18883..19527
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA50_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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19538..20050
DNA (513bp) protein (171aa)
N-acetyltransferase, GNAT family Tax=Candidatus Nitrospira defluvii RepID=D8PA49_9BACT
GNAT family acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20105..20527
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA48_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40107.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_90_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20538..20951
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA47_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40106.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_90_22
unknown

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21008..21355
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_90_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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21352..22584
DNA (1233bp) protein (411aa)
dmpA; peptidase S58 (EC:3.4.11.-)
Peptidase S58 Tax=Candidatus Nitrospira defluvii RepID=D8PA44_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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22720..22950
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA43_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

22976..24178
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA42_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_90_26
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24276..24722
DNA (447bp) protein (149aa)
fbp; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBK40100.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Peptidyl-prolyl cis-trans isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PA41_9BACT
PLM3_60_b1_sep16_scaffold_90_27
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24755..25867
DNA (1113bp) protein (371aa)
gcvT; glycine cleavage system aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Aminomethyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PA40_9BACT
PLM3_60_b1_sep16_scaffold_90_28
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

25872..26396
DNA (525bp) protein (175aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBK40098.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CBK40098.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ADP-ribose pyrophosphatase Tax=Candidatus Nitrospira defluvii RepID=D8PA39_9BACT
PLM3_60_b1_sep16_scaffold_90_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(26494..26688)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying items 1-30 of 39 in total

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