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PLM3_60_b1_sep16_scaffold_363

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_363_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3..470
DNA (468bp) protein (156aa)
carbamoyltransferase (EC:2.1.3.-)
Carbamoyltransferase {ECO:0000313|EMBL:CBK42573.1}; EC=2.1.3.- {ECO:0000313|EMBL:CBK42573.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Carbamoyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PH36_9BACT
PLM3_60_b1_sep16_scaffold_363_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

474..695
DNA (222bp) protein (74aa)
carbamoyltransferase (EC:2.1.3.-)
Carbamoyltransferase {ECO:0000313|EMBL:CBK42573.1}; EC=2.1.3.- {ECO:0000313|EMBL:CBK42573.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Carbamoyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PH36_9BACT
PLM3_60_b1_sep16_scaffold_363_3
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

710..925
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH29_9BACT
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3_60_b1_sep16_scaffold_363_4
unknown

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comp(922..1065)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_363_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1127..1279
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH28_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42565.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1426..2034)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH64_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42601.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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2504..2896
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH63_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_363_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3060..3770
DNA (711bp) protein (237aa)
Putative Polysaccharide export protein Tax=Candidatus Nitrospira defluvii RepID=D8PH62_9BACT
putative polysaccharide export protein
Putative Polysaccharide export protein {ECO:0000313|EMBL:CBK42599.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3848..4468
DNA (621bp) protein (207aa)
Putative Polysaccharide export protein Tax=Candidatus Nitrospira defluvii RepID=D8PH61_9BACT
putative polysaccharide export protein
Putative Polysaccharide export protein {ECO:0000313|EMBL:CBK42598.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4530..6002
DNA (1473bp) protein (491aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH60_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42597.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5999..8278
DNA (2280bp) protein (760aa)
Putative Lipopolysaccharide biosynthesis protein Tax=Candidatus Nitrospira defluvii RepID=D8PH59_9BACT
putative lipopolysaccharide biosynthesis protein
Putative Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CBK42596.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8262..9329
DNA (1068bp) protein (356aa)
putative undecaprenyl-phosphate galactose phosphotransferase RfbP (fragment) (EC:2.7.8.6)
Putative Undecaprenyl-phosphate galactose phosphotransferase RfbP {ECO:0000313|EMBL:CBK42595.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CBK42595.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Undecaprenyl-phosphate galactose phosphotransferase RfbP Tax=Candidatus Nitrospira defluvii RepID=D8PH58_9BACT
PLM3_60_b1_sep16_scaffold_363_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9332..10300
DNA (969bp) protein (323aa)
Putative Polysaccharide deacetylase Tax=Candidatus Nitrospira defluvii RepID=D8PH57_9BACT
putative polysaccharide deacetylase
Putative Polysaccharide deacetylase {ECO:0000313|EMBL:CBK42594.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_363_14
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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10311..10898
DNA (588bp) protein (196aa)
Transcriptional activator RfaH Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDY9_DEFDS
transcriptional activator RfaH
Transcriptional activator RfaH {ECO:0000313|EMBL:BAI80812.1}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC; 101012 / SSM1).;"
PLM3_60_b1_sep16_scaffold_363_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11265..13004
DNA (1740bp) protein (580aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KCZ72304.1}; EC=1.1.5.3 {ECO:0000313|EMBL:KCZ72304.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glycerol-3-phosphate dehydrogenase Tax=Moorea producens 3L RepID=F4XMP2_9CYAN
FAD dependent oxidoreductase
PLM3_60_b1_sep16_scaffold_363_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12962..14155
DNA (1194bp) protein (398aa)
Glycosyl transferase group 1 bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
YqgM-like family glycosyltransferase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM3_60_b1_sep16_scaffold_363_17
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14183..15199
DNA (1017bp) protein (339aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Planctomycete_KSU_39_26 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
NAD-dependent epimerase/dehydratase
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3_60_b1_sep16_scaffold_363_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15212..16198
DNA (987bp) protein (329aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06176.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
dbr:Deba_0617 NAD-dependent epimerase/dehydratase bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
NAD-dependent epimerase/dehydratase
PLM3_60_b1_sep16_scaffold_363_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16215..16487
DNA (273bp) protein (91aa)
asnB-1; asparagine synthetase, glutamine-hydrolyzing (EC:6.3.5.4)
Asparagine synthetase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3C4_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:ETX06175.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_b1_sep16_scaffold_363_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16563..17585
DNA (1023bp) protein (341aa)
asparagine synthase (EC:6.3.5.4)
Uncharacterized protein {ECO:0000313|EMBL:ETX06175.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Asparagine synthetase bin=GWB2_Desulfobacterales_56_26 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Displaying 20 items

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