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PLM3_60_b1_sep16_scaffold_976

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_976_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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3..158
DNA (156bp) protein (52aa)
forB; 2-oxoglutarate:ferredoxin oxidoredutase subunit beta (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase beta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBI0_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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217..951
DNA (735bp) protein (245aa)
forC; 2-oxoglutarate:ferredoxin oxidoredutase subunit gamma (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase gamma subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBI1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

969..1292
DNA (324bp) protein (108aa)
forE; 2-oxoglutarate:ferredoxin oxidoreductase aubunit epsilon (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoreductase epsilon subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBI2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1317..2078
DNA (762bp) protein (254aa)
forD; 2-oxoglutarate:ferredoxin oxidoredutase subunit delta (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase delta subunit {ECO:0000313|EMBL:CBK40592.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBK40592.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
2-oxoglutarate:ferredoxin oxidoredutase delta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBI3_9BACT
PLM3_60_b1_sep16_scaffold_976_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2171..3562
DNA (1392bp) protein (464aa)
forA; 2-oxoglutarate:ferredoxin oxidoredutase subunit alpha (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoredutase alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBI4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3644..3892)
DNA (249bp) protein (83aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ACB8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3952..5142
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBI6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5148..5345)
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBI7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40596.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_976_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5381..5740)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBI8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6145..6615
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBI9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_11
Pyrobaculum sp. 1860, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6689..7267
DNA (579bp) protein (193aa)
Uracil DNA glycosylase (Pa-UDGa) Tax=Pyrobaculum sp. 1860 RepID=G7VAX7_9CREN
uracil-DNA glycosylase
Uracil DNA glycosylase (Pa-UDGa) {ECO:0000313|EMBL:AET33555.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum sp. 1860.;"
PLM3_60_b1_sep16_scaffold_976_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7260..8090
DNA (831bp) protein (277aa)
mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA lyase (EC:3.2.2.23 4.2.99.18)
DNA-formamidopyrimidine glycosylase and DNA-(Apurinic or apyrimidinic site) lyase Tax=Candidatus Nitrospira defluvii RepID=D8PBJ0_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8326..9528
DNA (1203bp) protein (401aa)
aclB; ATP-citrate lyase subunit beta (EC:2.3.3.8)
ATP-citrate lyase, beta subunit {ECO:0000313|EMBL:CBK40600.1}; EC=2.3.3.8 {ECO:0000313|EMBL:CBK40600.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ATP-citrate lyase, beta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBJ1_9BACT
PLM3_60_b1_sep16_scaffold_976_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9604..11430
DNA (1827bp) protein (609aa)
aclA; ATP citrate lyase subunit alpha (EC:2.3.3.8)
ATP citrate lyase, alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PBJ2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_976_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11474..11668
DNA (195bp) protein (65aa)
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase {ECO:0000313|EMBL:CBK40602.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CBK40602.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Aconitate hydratase Tax=Candidatus Nitrospira defluvii RepID=D8PBJ3_9BACT
Displaying 15 items

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