ggKbase home page

PLM3_60_coex_sep16_scaffold_1546

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1546_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..249
DNA (249bp) protein (83aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase Tax=Bradyrhizobium sp. STM 3843 RepID=H0U0M7_9BRAD
PLM3_60_coex_sep16_scaffold_1546_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275..1195
DNA (921bp) protein (307aa)
Molecular chaperone Hsp33 Tax=Oceanibaculum indicum P24 RepID=K2JIY8_9PROT
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hslO; heat shock protein HSP33
PLM3_60_coex_sep16_scaffold_1546_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1202..2380)
DNA (1179bp) protein (393aa)
Acetylornithine deacetylase (ArgE) Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ47_PARL1
acetylornithine deacetylase ArgE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_60_coex_sep16_scaffold_1546_4
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2440..3099)
DNA (660bp) protein (220aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
GTP cyclohydrolase 1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VZE8_MAGSA
PLM3_60_coex_sep16_scaffold_1546_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3181..3573)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000374E0F4
apaG; ApaG protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3_60_coex_sep16_scaffold_1546_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3780..4604)
DNA (825bp) protein (275aa)
Outer membrane protein Tax=Oceanibaculum indicum P24 RepID=K2J2B8_9PROT
Outer membrane protein {ECO:0000313|EMBL:EKE69178.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ompA family protein
PLM3_60_coex_sep16_scaffold_1546_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4898..5548)
DNA (651bp) protein (217aa)
ABC transporter-related protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2S9_LEPCP
ABC transporter-like protein
ABC transporter-related protein {ECO:0000313|EMBL:ACB34421.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
PLM3_60_coex_sep16_scaffold_1546_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5545..7266)
DNA (1722bp) protein (574aa)
Binding-protein-dependent transport system inner membrane protein Tax=Oceanibaculum indicum P24 RepID=K2JVI7_9PROT
ABC transporter permease {ECO:0000313|EMBL:KJB93699.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
binding-protein-dependent transport system inner membrane protein
PLM3_60_coex_sep16_scaffold_1546_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7263..8465)
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2IGK2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE69181.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative ABC transporter solute-binding protein
PLM3_60_coex_sep16_scaffold_1546_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8575..9738
DNA (1164bp) protein (388aa)
dehydrogenase Tax=Burkholderia bryophila RepID=UPI00036EE0FA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_1546_trna_1
unknown

Not on your lists

9774..9844
DNA (71bp)
transferRNA Gly
PLM3_60_coex_sep16_scaffold_1546_11
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10719..11702)
DNA (984bp) protein (328aa)
Aldo-keto reductase Tax=Pseudomonas syringae pv. aceris str. M302273 RepID=F3JH95_PSESX
Aldo-keto reductase {ECO:0000313|EMBL:EGH71218.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. aceris str. M302273.;"
aldo/keto reductase family oxidoreductase
PLM3_60_coex_sep16_scaffold_1546_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11833..13203)
DNA (1371bp) protein (457aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKL9_METSB
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACK51389.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Displaying 13 items

View Taxonomy