ggKbase home page

PLM3_60_coex_sep16_scaffold_43431

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_43431_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Xylanase/chitin deacetylase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4J5_STRRD
Glycosyltransferase, family 2 {ECO:0000313|EMBL:EWM13324.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
xylanase/chitin deacetylase-like protein
PLM3_60_coex_sep16_scaffold_43431_2
unknown

Not on your lists

596..853
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_43431_3
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

816..1814
DNA (999bp) protein (333aa)
Glycosyl transferase, family 2 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V155_ROSS1
glycosyl transferase family protein
Tax=GWB2_Planctomycetes_41_19_curated
PLM3_60_coex_sep16_scaffold_43431_4

Not on your lists

1984..3009
DNA (1026bp) protein (342aa)
Marine sediment metagenome DNA, contig: S01H1_S04966 {ECO:0000313|EMBL:GAF94222.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD-dependent epimerase/dehydratase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
DegT/DnrJ/EryC1/StrS aminotransferase
PLM3_60_coex_sep16_scaffold_43431_5
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

3006..3749
DNA (744bp) protein (248aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002F2701E
hypothetical protein
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3_60_coex_sep16_scaffold_43431_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3822..4415
DNA (594bp) protein (198aa)
dTDP-4-dehydrorhamnose 35-epimerase {ECO:0000313|EMBL:EHN11724.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EHN11724.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 35-epimerase Tax=Patulibacter medicamentivorans RepID=H0E3M2_9ACTN
Displaying 6 items

View Taxonomy