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PLM3_60_coex_sep16_scaffold_11606

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_11606_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2..322
DNA (321bp) protein (107aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABG03607.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABG03607.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYC1_RUBXD
PLM3_60_coex_sep16_scaffold_11606_2
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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319..1410
DNA (1092bp) protein (364aa)
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
Cobyrinic acid A,C-diamide synthase Tax=Streptomyces sp. HPH0547 RepID=S3C603_9ACTO
cobyrinic acid a,c-diamide synthase
PLM3_60_coex_sep16_scaffold_11606_3
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1407..1706
DNA (300bp) protein (100aa)
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
cobyrinic acid a,c-diamide synthase Tax=Streptomyces sp. HmicA12 RepID=UPI000375F60B
cobB; cobyrinic acid a,c-diamide synthase
PLM3_60_coex_sep16_scaffold_11606_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1703..2446
DNA (744bp) protein (248aa)
Precorrin-2 C20-methyltransferase Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QGL3_CATAD
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:ETK37094.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
precorrin-2 C(20)-methyltransferase
PLM3_60_coex_sep16_scaffold_11606_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2443..3297
DNA (855bp) protein (285aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI0003665AD6
precorrin-4 C(11)-methyltransferase
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:ABW13546.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_11606_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3272..5395
DNA (2124bp) protein (708aa)
precorrin-6Y C5,15-methyltransferase (EC:2.1.1.132)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) {ECO:0000313|EMBL:ABG03612.1}; EC=2.1.1.132 {ECO:0000313|EMBL:ABG03612.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB6_RUBXD
PLM3_60_coex_sep16_scaffold_11606_7
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5392..7065
DNA (1674bp) protein (558aa)
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase Tax=Streptomyces lividans 1326 RepID=S1SZV5_STRLI
bifunctional CbiGH
Bifunctional CbiGH {ECO:0000313|EMBL:AIJ16594.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_60_coex_sep16_scaffold_11606_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7062..7238
DNA (177bp) protein (59aa)
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB4_RUBXD
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABG03614.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_11606_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7788..8501
DNA (714bp) protein (238aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB2_RUBXD
cobalamin (vitamin B12) biosynthesis CbiX protein
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ABG03616.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_11606_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8494..11085
DNA (2592bp) protein (864aa)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYB1_RUBXD
PLM3_60_coex_sep16_scaffold_11606_11
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11253..12182)
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase Tax=Halorubrum aidingense JCM 13560 RepID=M0P9W3_9EURY
PLM3_60_coex_sep16_scaffold_11606_12
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12238..14178
DNA (1941bp) protein (647aa)
UvrABC system protein C Tax=Streptomyces sp. Mg1 RepID=B4V7W4_9ACTO
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
uvrC; excinuclease ABC subunit C
PLM3_60_coex_sep16_scaffold_11606_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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14175..14393
DNA (219bp) protein (73aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00037E824A
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 13 items

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