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PLM3_60_coex_sep16_scaffold_5235

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5235_1
unknown

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comp(12..743)
DNA (732bp) protein (244aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5235_2
unknown

Not on your lists

comp(892..1452)
DNA (561bp) protein (187aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5235_3
unknown

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comp(1760..1927)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5235_4
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1981..2280)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MWG2_SACVD
Transcription factor WhiB-like protein
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM3_60_coex_sep16_scaffold_5235_5
unknown

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comp(2405..2581)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5235_6
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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2803..3909
DNA (1107bp) protein (369aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=GWB2_Chloroflexi_54_36_curated
PLM3_60_coex_sep16_scaffold_5235_7
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3933..6560)
DNA (2628bp) protein (876aa)
alkaline serine protease Tax=Laceyella sacchari RepID=UPI0003B67311
subtilase family serine protease
Serine protease, subtilase family {ECO:0000313|EMBL:ABB30991.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM3_60_coex_sep16_scaffold_5235_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6712..7884)
DNA (1173bp) protein (391aa)
molybdopterin biosynthesis MoeZ Tax=Frankia sp. BCU110501 RepID=UPI00037DA5E1
molybdopterin biosynthesis-like protein MoeZ
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABW10378.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_5235_9
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7910..8227)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UYZ2_MYCFO
metal-sulfur cluster biosynthetic enzyme
PaaD-like protein (DUF59) involved in Fe-S cluster assembly {ECO:0000313|EMBL:AIY46534.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
PLM3_60_coex_sep16_scaffold_5235_10
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8251..8769)
DNA (519bp) protein (173aa)
SUF system FeS assembly protein, NifU family Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7F3_SACES
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:CCH33477.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_60_coex_sep16_scaffold_5235_11
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8786..9946)
DNA (1161bp) protein (387aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
Cysteine desulfurase Tax=Chloroflexus RepID=A9WKN9_CHLAA
SufS subfamily cysteine desulfurase
PLM3_60_coex_sep16_scaffold_5235_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10003..10581)
DNA (579bp) protein (193aa)
iron ABC transporter ATP-binding protein Tax=Nonomuraea coxensis RepID=UPI0003654B4A
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ABG03149.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_5235_13
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10578..10802)
DNA (225bp) protein (75aa)
Iron ABC transporter ATP-binding protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PK22_9ACTO
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ABX03064.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_60_coex_sep16_scaffold_5235_14
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10828..11169)
DNA (342bp) protein (114aa)
Rieske (2Fe-2S) protein Tax=Nocardiopsis salina RepID=UPI000347C7B5
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KES04214.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
putative ferredoxin subunit of phenylpropionate dioxygenase
PLM3_60_coex_sep16_scaffold_5235_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11169..12587)
DNA (1419bp) protein (473aa)
Iron-regulated ABC transporter permease protein SufD Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZN2_RUBXD
Iron-regulated ABC transporter permease SufD
Iron-regulated ABC transporter permease protein SufD {ECO:0000313|EMBL:ABG03146.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_5235_16
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12590..13720)
DNA (1131bp) protein (377aa)
Fe-S cluster assembly protein SufB Tax=Streptomyces sp. TOR3209 RepID=UPI0002E67466
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:KFG76137.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
sufB; FeS cluster assembly protein SufB
Displaying 16 items

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