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PLM3_60_coex_sep16_scaffold_4080

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4080_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4080_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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246..599
DNA (354bp) protein (118aa)
Transcriptional regulator, TraR/DksA family Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UDU3_CELFN
TraR/DksA family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4080_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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646..1833
DNA (1188bp) protein (396aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
DeoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R927_9THEO
PLM3_60_coex_sep16_scaffold_4080_4
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1846..2142)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZNC1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EYD75001.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4080_5
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2332..3396)
DNA (1065bp) protein (355aa)
Diguanylate cyclase/phosphodiesterase Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WAT4_KINRD
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABS03923.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM3_60_coex_sep16_scaffold_4080_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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3710..4471
DNA (762bp) protein (254aa)
Cobyrinic acid a,c-diamide synthase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUA2_ACIC1
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABK53012.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_4080_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4468..4812
DNA (345bp) protein (115aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00038147AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17386.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3_60_coex_sep16_scaffold_4080_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4961..6274
DNA (1314bp) protein (438aa)
Pyrimidine-nucleoside phosphorylase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NY19_9FIRM
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EKP93770.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
pyrimidine-nucleoside phosphorylase
PLM3_60_coex_sep16_scaffold_4080_9
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

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6476..7117
DNA (642bp) protein (214aa)
Peptidase M50 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT82_DESRL
peptidase M50
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
PLM3_60_coex_sep16_scaffold_4080_10
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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7326..8636
DNA (1311bp) protein (437aa)
Segregation and condensation protein A Tax=Ilumatobacter coccineus YM16-304 RepID=M5ANM0_9ACTN
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000313|EMBL:BAN02810.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_4080_11
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8692..9378
DNA (687bp) protein (229aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Pseudouridine synthase Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF13_CELFN
pseudouridine synthase
Displaying 11 items

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