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PLM3_60_coex_sep16_scaffold_4604

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4604_1
unknown

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comp(2..994)
DNA (993bp) protein (331aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4604_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1068..1661)
DNA (594bp) protein (198aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY24_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA24265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_4604_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1774..2451
DNA (678bp) protein (226aa)
RNA polymerase sigma24 factor Tax=Frankia sp. BMG5.12 RepID=UPI0003704004
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP84589.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_4604_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2448..2696
DNA (249bp) protein (83aa)
Putative transmembrane anti-sigma factor Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF6_ANADF
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABS27802.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_60_coex_sep16_scaffold_4604_5
unknown

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2757..3230
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4604_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3328..4353
DNA (1026bp) protein (342aa)
NurA domain-containing protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4604_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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4374..5954
DNA (1581bp) protein (527aa)
hypothetical protein; K06915 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4604_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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5954..7105
DNA (1152bp) protein (384aa)
DNA double-strand break repair protein Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8L7_9EURY
DNA double-strand break repair protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4604_9
BJP_IG2158_Actinobacteria_57_21, Bacteria

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7106..10879
DNA (3774bp) protein (1258aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003666D59
SMC domain protein
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_60_coex_sep16_scaffold_4604_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11201..11473
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B324_FRADG
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4604_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11470..13074
DNA (1605bp) protein (535aa)
Apolipoprotein N-acyltransferase Tax=Modestobacter marinus (strain BC501) RepID=I4EVG1_MODMB
apolipoprotein N-acyltransferase
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CCH87374.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_4604_12
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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13071..13811
DNA (741bp) protein (247aa)
dolichol-phosphate mannosyltransferase Tax=Streptomyces purpureus RepID=UPI000369A173
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KJY33394.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
glycosyl transferase family protein
PLM3_60_coex_sep16_scaffold_4604_13
unknown

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13837..13926
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 13 items

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