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PLM3_60_coex_sep16_scaffold_1672

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1672_1
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..1562)
DNA (1560bp) protein (520aa)
Na-Ca exchanger/integrin-beta4 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3F88 bin=RBG9 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3_60_coex_sep16_scaffold_1672_2
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1824..2504)
DNA (681bp) protein (227aa)
Hemolysin-type calcium-binding protein Tax=Salipiger mucosus DSM 16094 RepID=S9RBR6_9RHOB
Hemolysin-type calcium-binding protein {ECO:0000313|EMBL:EPX75555.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
hemolysin-type calcium-binding region
PLM3_60_coex_sep16_scaffold_1672_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2607..3074)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000376E68D
Uncharacterized protein {ECO:0000313|EMBL:ETW99588.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1672_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3071..3448)
DNA (378bp) protein (126aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate cyclase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_1672_5
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3462..4454)
DNA (993bp) protein (331aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036B8643
Uncharacterized protein {ECO:0000313|EMBL:KJY20857.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
FG-GAP repeat-containing protein
PLM3_60_coex_sep16_scaffold_1672_6
unknown

Not on your lists

comp(4915..5052)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1672_7
unknown

Not on your lists

5449..5730
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1672_8

Not on your lists

6232..6975
DNA (744bp) protein (248aa)
Bll7692 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CV3_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KKK90803.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hydrolase
PLM3_60_coex_sep16_scaffold_1672_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6942..7565
DNA (624bp) protein (208aa)
Adenylyl cyclase Tax=Modestobacter marinus (strain BC501) RepID=I4EV18_MODMB
adenylyl cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_1672_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7571..8602
DNA (1032bp) protein (344aa)
Strictosidine synthase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EP28_STRRM
Strictosidine synthase {ECO:0000313|EMBL:EWM13427.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1672_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

8842..9690
DNA (849bp) protein (283aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1672_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9590..10438)
DNA (849bp) protein (283aa)
Putative integral membrane protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H3J4_ACTM4
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(10501..11208)
DNA (708bp) protein (236aa)
alaS; threonyl/alanyl tRNA synthetase SAD (EC:6.1.1.7)
threonyl/alanyl tRNA synthetase SAD; K07050 bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11256..12044)
DNA (789bp) protein (263aa)
Alpha/beta hydrolase fold protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FFL4_VERMA
alpha/beta hydrolase fold protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12095..12370
DNA (276bp) protein (92aa)
hypothetical protein Tax=Maricaulis sp. JL2009 RepID=UPI0003B68C57
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12375..12908)
DNA (534bp) protein (178aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_1672_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(12918..16289)
DNA (3372bp) protein (1124aa)
Uncharacterized protein Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RKU7_9ACTO
major facilitator superfamily transporter
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(16395..18062)
DNA (1668bp) protein (556aa)
Type I phosphodiesterase / nucleotide pyrophosphatase Tax=Prevotella bergensis DSM 17361 RepID=D1PWZ2_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18074..19447)
DNA (1374bp) protein (458aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9A347_9LEPT
alkaline phosphatase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19689..21014
DNA (1326bp) protein (442aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_21
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21015..22016
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034C6F6A
permease
Permease {ECO:0000313|EMBL:AGM06147.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM3_60_coex_sep16_scaffold_1672_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22013..22771
DNA (759bp) protein (253aa)
Membrane protein-like Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6M9_HERA2
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

22807..23568
DNA (762bp) protein (254aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
zinc/iron permease
Tax=AR15
PLM3_60_coex_sep16_scaffold_1672_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23570..23953)
DNA (384bp) protein (128aa)
GntR family transcriptional regulator Tax=Saccharopolyspora spinosa RepID=UPI0002379A8E
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR62380.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
PLM3_60_coex_sep16_scaffold_1672_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23992..25029
DNA (1038bp) protein (346aa)
Luciferase-like monooxygenase superfamily bin=GWC2_Chloroflexi_73_18 species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1672_26
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25030..26430
DNA (1401bp) protein (467aa)
YibE/F family protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PW82_KRIFD
YibE/F family protein
YibE/F family protein {ECO:0000313|EMBL:ADB31534.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_1672_27

Not on your lists

comp(26357..26713)
DNA (357bp) protein (119aa)
hypothetical protein
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWA2_Ignavibacteria_55_11 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Uncharacterized protein {ECO:0000313|EMBL:KKK59924.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_1672_28
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(26725..27129)
DNA (405bp) protein (135aa)
activator of Hsp90 ATPase 1 family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_60_coex_sep16_scaffold_1672_29
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27098..27433)
DNA (336bp) protein (112aa)
Putative transcriptional regulator Tax=Gordonia terrae C-6 RepID=R7Y7J2_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:EON31970.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae C-6.;"
putative transcriptional regulators
PLM3_60_coex_sep16_scaffold_1672_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(27491..28258)
DNA (768bp) protein (256aa)
HhH-GPD family protein bin=GWC2_Chloroflexi_73_18 species=Isoptericola variabilis genus=Isoptericola taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HhH-GPD family protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 1-30 of 39 in total

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