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PLM3_60_coex_sep16_scaffold_501

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_501_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..369)
DNA (369bp) protein (123aa)
Hydrolase Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAM6_9CREN
bioH; pimeloyl-CoA synthesis protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(366..1160)
DNA (795bp) protein (265aa)
Pimeloyl-CoA synthesis protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I121_CALAS
bioH; pimeloyl-CoA synthesis protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(1157..1642)
DNA (486bp) protein (162aa)
Histidine triad (HIT) protein Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V9C2_THELD
histidine triad (HIT) protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(1649..3577)
DNA (1929bp) protein (643aa)
threonyl-tRNA synthetase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368BE2A
threonyl-tRNA synthetase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3658..6210)
DNA (2553bp) protein (851aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LH63_FRASN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(6216..6977)
DNA (762bp) protein (254aa)
ABC transporter related Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9E3_NAKMY
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV77211.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_60_coex_sep16_scaffold_501_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7132..8346
DNA (1215bp) protein (405aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_501_8
unknown

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8378..8602
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_501_9

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comp(8590..9942)
DNA (1353bp) protein (451aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000378C134
Glutamine synthetase, catalytic domain protein {ECO:0000313|EMBL:AIA11847.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glutamine synthetase
PLM3_60_coex_sep16_scaffold_501_10
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9997..10770)
DNA (774bp) protein (258aa)
N-acetyltransferase GCN5 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V1V6_MYCVA
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EJZ13001.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
acetyltransferase
PLM3_60_coex_sep16_scaffold_501_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10854..14249)
DNA (3396bp) protein (1132aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UE3_SOLUE
serine/threonine protein kinase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_501_12
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14382..15542)
DNA (1161bp) protein (387aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003626BA2
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACY13897.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_60_coex_sep16_scaffold_501_13

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comp(16335..16619)
DNA (285bp) protein (95aa)
Putative uncharacterized protein Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IPM3_KORVE bin=RBG2 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S01H1_L05746 {ECO:0000313|EMBL:GAF67469.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GYD family protein
PLM3_60_coex_sep16_scaffold_501_14
unknown

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comp(16802..18010)
DNA (1209bp) protein (403aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_501_15
unknown

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comp(18048..18182)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_501_16
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

18213..19070
DNA (858bp) protein (286aa)
WD40-like Beta Propeller bin=GWA2_Ignavibacteria_55_11 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RBG_16_Chloroflexi_48_7_curated
PLM3_60_coex_sep16_scaffold_501_17
unknown

Not on your lists

19049..20086
DNA (1038bp) protein (346aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_501_18
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20252..20485
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator Tax=Streptomyces vitaminophilus RepID=UPI00037F3F18
AsnC family transcriptional regulator {ECO:0000313|EMBL:KDN83047.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
AsnC family transcriptional regulator
PLM3_60_coex_sep16_scaffold_501_19
unknown

Not on your lists

21071..21790
DNA (720bp) protein (240aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_501_20
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21783..22127
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Desulfococcus multivorans RepID=S7VC52_DESML
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ13794.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_501_21
unknown

Not on your lists

22178..22261
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 21 items

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