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PLM3_60_coex_sep16_scaffold_820

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_820_1
unknown

Not on your lists

3..116
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_820_trna_1
unknown

Not on your lists

718..792
DNA (75bp)
transferRNA Pro
PLM3_60_coex_sep16_scaffold_820_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

827..1252
DNA (426bp) protein (142aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1158..1457)
DNA (300bp) protein (100aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1454..1783)
DNA (330bp) protein (110aa)
Putative TetR family transcriptional regulator Tax=Gordonia effusa NBRC 100432 RepID=H0R5P1_9ACTO
transcriptional regulator, TetR family
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1924..2697)
DNA (774bp) protein (258aa)
Histidinol-phosphate phosphatase HisN Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VQC9_9CORY
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2775..4157
DNA (1383bp) protein (461aa)
hypothetical protein Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000368C297
trigger factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4154..4783
DNA (630bp) protein (210aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBL2_AMMDK
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4844..6109
DNA (1266bp) protein (422aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Actinomadura madurae LIID-AJ290 RepID=U2MGJ1_9ACTO
ATP-dependent Clp protease, ATP-binding subunit ClpX
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

6112..6552
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JPN5_9GAMM
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_60_coex_sep16_scaffold_820_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6561..9971)
DNA (3411bp) protein (1137aa)
Adenylyl cyclase class-3/4/guanylyl cyclase bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate/guanylate cyclase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_820_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


10217..12763
DNA (2547bp) protein (849aa)
valyl-tRNA synthetase Tax=Nocardiopsis baichengensis RepID=UPI00034D85E6
tRNA synthetase valyl/leucyl anticodon-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_820_12
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12768..14057
DNA (1290bp) protein (430aa)
FolC bifunctional protein Tax=Frankia sp. EUN1f RepID=D3D4V4_9ACTO
FolC bifunctional protein {ECO:0000313|EMBL:EFC82068.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
PLM3_60_coex_sep16_scaffold_820_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14054..14458
DNA (405bp) protein (135aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSW0_ACIC1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14470..15702)
DNA (1233bp) protein (411aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Thermincola potens (strain JR) RepID=D5X8P0_THEPJ
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15708..15956)
DNA (249bp) protein (83aa)
Acyl carrier protein bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
acpP; acyl carrier protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(16029..16811)
DNA (783bp) protein (261aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Collinsella tanakaei YIT 12063 RepID=G1WL30_9ACTN
3-oxoacyl-ACP reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(16766..17770)
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ERB8_CORAD
3-oxoacyl-(acyl-carrier-protein) synthase III
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(17876..18448)
DNA (573bp) protein (191aa)
Malonyl CoA-acyl carrier protein transacylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
malonyl CoA-acyl carrier protein transacylase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18412..18696)
DNA (285bp) protein (95aa)
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase Tax=Clostridium sp. CAG:230 RepID=R6DC47_9CLOT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19352..19534)
DNA (183bp) protein (61aa)
id=4318024 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3_60_coex_sep16_scaffold_820_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19628..19996
DNA (369bp) protein (123aa)
Cell shape determining protein, MreB/Mrl family Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2Z6_FRADG
MreB/Mrl family cell shape determining protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20003..20860
DNA (858bp) protein (286aa)
Cell shape-determining protein MreC Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C3L2_STRBB
merC; rod shape-determining protein MreC
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20872..21378
DNA (507bp) protein (169aa)
Rod shape-determining protein MreD Tax=Clostridium sp. CAG:62 RepID=R7C9I3_9CLOT
rod shape-determining protein MreD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_24
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

21386..23341
DNA (1956bp) protein (652aa)
Penicillin-binding protein 2 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L9F2_NOCAA
mrdA; penicillin-binding protein 2
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_820_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23341..24477
DNA (1137bp) protein (379aa)
Rod shape-determining protein RodA Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMC6_NOCSJ
rod shape-determining protein RodA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_820_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(24489..25592)
DNA (1104bp) protein (368aa)
Response regulator Tax=Desulfovibrio sp. A2 RepID=G2H2Q7_9DELT
Hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 27 items

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