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PLM3_60_coex_sep16_scaffold_1630

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1630_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3..959)
DNA (957bp) protein (319aa)
Putative Coenzyme F420-reducing hydrogenase subunit beta Tax=Candidatus Microthrix RepID=R4Z5U0_9ACTN
putative oxidoreductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1630_2
unknown

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1052..1534
DNA (483bp) protein (161aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1630_3
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1546..2052)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RQA3_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:KJE21422.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1630_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2169..2495)
DNA (327bp) protein (109aa)
Probable ferredoxin 2Fe-2S protein Tax=Azoarcus sp. (strain BH72) RepID=A1KAX8_AZOSB
fer22; ferredoxin 2Fe-2S protein
Probable ferredoxin 2Fe-2S protein {ECO:0000313|EMBL:CAL95984.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM3_60_coex_sep16_scaffold_1630_5
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2623..2937)
DNA (315bp) protein (105aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYP0_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ78998.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_60_coex_sep16_scaffold_1630_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2952..3380)
DNA (429bp) protein (143aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYN9_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ78997.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_60_coex_sep16_scaffold_1630_7
unknown

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3510..4112
DNA (603bp) protein (201aa)
hypothetical protein
PLM3_60_coex_sep16_scaffold_1630_8
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4109..4546
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Clostridium ultunense Esp RepID=M1ZJQ1_9CLOT
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3_60_coex_sep16_scaffold_1630_9
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4543..5403)
DNA (861bp) protein (287aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036CDC58
folP; dihydropteroate synthase
PLM3_60_coex_sep16_scaffold_1630_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5446..5907
DNA (462bp) protein (154aa)
Polyketide cyclase Tax=Modestobacter marinus (strain BC501) RepID=I4ET87_MODMB
Uncharacterized protein {ECO:0000313|EMBL:EWC61235.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
polyketide cyclase
PLM3_60_coex_sep16_scaffold_1630_11
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5945..6433
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2NB68_9ACTO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFM18147.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM3_60_coex_sep16_scaffold_1630_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6448..7206)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Longispora albida RepID=UPI000379CB94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45016.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_60_coex_sep16_scaffold_1630_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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7341..8294
DNA (954bp) protein (318aa)
ABC-type multidrug transport system, ATPase component bin=GWC2_Chloroflexi_73_18 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC-type multidrug transport system, ATPase component
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1630_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

8299..9486
DNA (1188bp) protein (396aa)
multidrug ABC transporter permease Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625992
ABC-type multidrug transport system, permease component
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_1630_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9506..10657
DNA (1152bp) protein (384aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625991
ABC-type multidrug transport system, permease component
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1630_16
unknown

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10743..11273
DNA (531bp) protein (177aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1630_17
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11374..12465
DNA (1092bp) protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD77874.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM3_60_coex_sep16_scaffold_1630_18
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12472..12717)
DNA (246bp) protein (82aa)
Putative diguanylate cyclase/phosphodiesterase with PAS sensor Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W724_9ACTO
putative diguanylate cyclase/phosphodiesterase with PAS sensor
Putative diguanylate cyclase/phosphodiesterase with PAS sensor {ECO:0000313|EMBL:AGZ44998.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_1630_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(12744..14753)
DNA (2010bp) protein (670aa)
Putative signaling protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B4_GEMAT
diguanylate cyclase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 19 items

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