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PLM3_60_coex_sep16_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_161_1
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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1..336
DNA (336bp) protein (112aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 family protein Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXH6_BREDI
glycoside hydrolase family protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3_60_coex_sep16_scaffold_161_2
unknown

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comp(358..831)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_3
unknown

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939..1142
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_4
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1649..3019
DNA (1371bp) protein (457aa)
PASTA-related domain-containing protein (Fragment) Tax=Arthrobacter sp. SJCon RepID=L8TGX1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:CCQ47163.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
PASTA-related domain-containing protein
PLM3_60_coex_sep16_scaffold_161_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3638..4156)
DNA (519bp) protein (173aa)
carboxylesterase (EC:3.1.1.1)
Carboxylesterase {ECO:0000313|EMBL:ACZ84990.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ACZ84990.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein Tax=Salinispora pacifica RepID=UPI000371D0A8
PLM3_60_coex_sep16_scaffold_161_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4565..5035
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8A7_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73529.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_161_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5396..5764)
DNA (369bp) protein (123aa)
glyoxalase Tax=Frankia sp. Iso899 RepID=UPI0003B391C7
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFH88117.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_60_coex_sep16_scaffold_161_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5995..6675)
DNA (681bp) protein (227aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000370A841
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_60_coex_sep16_scaffold_161_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6703..9261)
DNA (2559bp) protein (853aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LNK9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL18596.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_60_coex_sep16_scaffold_161_10
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9261..10046)
DNA (786bp) protein (262aa)
macB; Macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
Macrolide export ATP-binding/permease protein MacB Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K9N5_SACES
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK46992.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
PLM3_60_coex_sep16_scaffold_161_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10097..10375)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C684_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37622.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_161_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10517..11182)
DNA (666bp) protein (222aa)
Two-component response regulator Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYA6_9ACTO
Two-component response regulator {ECO:0000313|EMBL:CCH16553.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
putative two-component system response regulator
PLM3_60_coex_sep16_scaffold_161_13
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11179..12348)
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037F92ED
Uncharacterized protein {ECO:0000313|EMBL:KIH97904.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
integral membrane sensor signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_161_14
unknown

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comp(12398..13135)
DNA (738bp) protein (246aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_15
unknown

Not on your lists

13665..14231
DNA (567bp) protein (189aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14565..14873
DNA (309bp) protein (103aa)
Ti-type conjugative transfer relaxase TraA Tax=Patulibacter medicamentivorans RepID=H0E9B9_9ACTN
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EHN09729.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
PLM3_60_coex_sep16_scaffold_161_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14918..16669
DNA (1752bp) protein (584aa)
Ti-type conjugative transfer relaxase TraA Tax=Patulibacter medicamentivorans RepID=H0E9B9_9ACTN
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EHN09729.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_161_18
unknown

Not on your lists

16769..18334
DNA (1566bp) protein (522aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_19
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18355..19359
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2KAL7_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY94360.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_60_coex_sep16_scaffold_161_20
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19459..22101)
DNA (2643bp) protein (881aa)
Uncharacterized protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82R93_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC67959.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM3_60_coex_sep16_scaffold_161_21
unknown

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22116..23051
DNA (936bp) protein (312aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_22
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23358..23975)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000377C234
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99409.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_60_coex_sep16_scaffold_161_23
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(23972..25168)
DNA (1197bp) protein (399aa)
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9VET1_9ACTO
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AJK55574.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM3_60_coex_sep16_scaffold_161_24
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(25446..25625)
DNA (180bp) protein (60aa)
hypothetical protein Tax=Oceanospirillales bacterium SCGC AAA298-N10 RepID=UPI000378C57D
Uncharacterized protein {ECO:0000313|EMBL:ELU12159.1, ECO:0000313|EnsemblMetazoa:CapteP204704}; species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
PPE family protein
PLM3_60_coex_sep16_scaffold_161_25
unknown

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25825..25953
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_26
unknown

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26499..27023
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_27
unknown

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27054..27695
DNA (642bp) protein (214aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_161_28
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

27931..29250
DNA (1320bp) protein (440aa)
Transposase IS4 family protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW7_PSEUX
transposase IS4 family protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_161_29
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(29509..33312)
DNA (3804bp) protein (1268aa)
Peptidase C14, caspase catalytic subunit p20 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPL5_ROSS1
peptidase C14, caspase catalytic subunit p20
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABQ88568.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_60_coex_sep16_scaffold_161_30

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comp(33338..33778)
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos18H11 RepID=Q64D82_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82645.1}; species="Archaea; environmental samples.;" source="uncultured archaeon GZfos18H11.;"
Displaying items 1-30 of 40 in total

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