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PLM3_60_coex_sep16_scaffold_487

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_487_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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3..155
DNA (153bp) protein (51aa)
polyphosphate kinase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B69277
hypothetical protein
Tax=CG_Anaero_02
PLM3_60_coex_sep16_scaffold_487_2
unknown

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168..305
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_3
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(678..1046)
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NGP6_KYTSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV07568.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
PLM3_60_coex_sep16_scaffold_487_4
unknown

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1091..2719
DNA (1629bp) protein (543aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_trna_2
unknown

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comp(2786..2858)
DNA (73bp)
transferRNA Asn
PLM3_60_coex_sep16_scaffold_487_5

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comp(2849..3151)
DNA (303bp) protein (101aa)
hypothetical protein SvirD4_16505 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4D269 bin=ACD38 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Marine sediment metagenome DNA, contig: S01H1_S28040 {ECO:0000313|EMBL:GAG32875.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_487_6
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3567..4304)
DNA (738bp) protein (246aa)
Abortive infection protein Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UFX6_MYCVA
Abortive infection protein {ECO:0000313|EMBL:EJZ06172.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
CAAX amino protease
PLM3_60_coex_sep16_scaffold_487_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4823..4990
DNA (168bp) protein (56aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8N0_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL46378.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM3_60_coex_sep16_scaffold_487_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5025..6440
DNA (1416bp) protein (472aa)
Methyltransferase type 11 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L3B5_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:CCH18312.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
methyltransferase
PLM3_60_coex_sep16_scaffold_487_9
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6458..6973
DNA (516bp) protein (172aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase Tax=Frankia alni (strain ACN14a) RepID=Q0RN18_FRAAA
NADH dehydrogenase/NAD(P)H nitroreductase
Putative NADH dehydrogenase/NAD(P)H nitroreductase {ECO:0000313|EMBL:CAJ61077.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_487_10
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7190..7741
DNA (552bp) protein (184aa)
hypothetical protein Tax=Methylotenera mobilis RepID=UPI000368D972
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
PLM3_60_coex_sep16_scaffold_487_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8312..8545)
DNA (234bp) protein (78aa)
Transcriptional regulator, AsnC family Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB39_THECD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACY98982.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_487_12
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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8751..9194
DNA (444bp) protein (148aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000376560A
nitroreductase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_60_coex_sep16_scaffold_487_13
Penicillium brasilianum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

9876..11264
DNA (1389bp) protein (463aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376779B
Uncharacterized protein {ECO:0000313|EMBL:CEJ59505.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium brasilianum.;"
hyalin
PLM3_60_coex_sep16_scaffold_487_14
unknown

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comp(11658..11768)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_15
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12204..12887
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0FIE8_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN22479.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
PLM3_60_coex_sep16_scaffold_487_16
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13127..13624)
DNA (498bp) protein (166aa)
Ribonuclease H (EC:3.1.26.4)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003668927
Ribonuclease H {ECO:0000313|EMBL:KJK10212.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
PLM3_60_coex_sep16_scaffold_487_17
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14259..15485)
DNA (1227bp) protein (409aa)
Membrane protein Tax=Rhodopirellula sallentina SM41 RepID=M5U2Z4_9PLAN
Membrane protein {ECO:0000313|EMBL:EMI52211.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
PLM3_60_coex_sep16_scaffold_487_18
unknown

Not on your lists

16288..16455
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_19
unknown

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16891..17082
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_trna_1
unknown

Not on your lists

17044..17117
DNA (74bp)
transferRNA Met
PLM3_60_coex_sep16_scaffold_487_20
unknown

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comp(17055..17297)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_21
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17423..19744
DNA (2322bp) protein (774aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9D8J2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80558.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
sulfatase
PLM3_60_coex_sep16_scaffold_487_22
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19778..20161)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037C2543
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:AGM07901.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM3_60_coex_sep16_scaffold_487_23
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20224..20625
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4FG32_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM03007.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM3_60_coex_sep16_scaffold_487_24
unknown

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comp(20792..20917)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_487_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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21328..22647
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67527.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_60_coex_sep16_scaffold_487_26
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22652..23152
DNA (501bp) protein (167aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034958E8
short-chain dehydrogenase
Putative oxidoreductase {ECO:0000313|EMBL:GAJ79126.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
PLM3_60_coex_sep16_scaffold_487_27
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23338..23493
DNA (156bp) protein (52aa)
Putative ABC transporter ATP-binding protein Tax=Rhodococcus opacus (strain B4) RepID=C1B304_RHOOB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAM46909.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
putative ABC transporter ATP-binding protein YhcH
Displaying 29 items

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