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PLM3_60_coex_sep16_scaffold_686

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_686_1
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
Hydrolase Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WHH3_9NOCA
Hydrolase {ECO:0000313|EMBL:EID75839.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
putative mutator mutT1 protein
PLM3_60_coex_sep16_scaffold_686_2
unknown

Not on your lists

comp(754..897)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_686_3
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1058..1978)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Rhodococcus equi (strain 103S) RepID=E4WG17_RHOE1
hypothetical protein
Sulfatase-modifying factor 1 {ECO:0000313|EMBL:AKE88054.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
PLM3_60_coex_sep16_scaffold_686_4
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2176..3006
DNA (831bp) protein (277aa)
Putative uncharacterized protein Tax=Streptomyces sviceus ATCC 29083 RepID=B5I4A9_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY59914.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_686_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2987..3520
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ENA8_STRRM
Uncharacterized protein {ECO:0000313|EMBL:ELQ80730.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_686_6
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3582..3815
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ERL9_STRRM
Uncharacterized protein {ECO:0000313|EMBL:ELQ80722.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_686_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3815..4537
DNA (723bp) protein (241aa)
Putative abortive infection protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKP5_BLASD
putative abortive infection protein
Putative abortive infection protein {ECO:0000313|EMBL:CCG03661.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_686_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4857..5279
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCA8_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81502.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_60_coex_sep16_scaffold_686_9
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5302..6294
DNA (993bp) protein (331aa)
Putative ribonuclease Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N6G8_KITSK
Putative ribonuclease {ECO:0000313|EMBL:KDN87254.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
putative ribonuclease
PLM3_60_coex_sep16_scaffold_686_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6301..7623)
DNA (1323bp) protein (441aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036F9E61
Membrane protein {ECO:0000313|EMBL:EWT01619.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
integral membrane protein
PLM3_60_coex_sep16_scaffold_686_11
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7683..10037)
DNA (2355bp) protein (785aa)
Arylsulfatase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TML2_METAC
Arylsulfatase {ECO:0000313|EMBL:KKH94664.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
atsA; arylsulfatase
PLM3_60_coex_sep16_scaffold_686_12
unknown

Not on your lists

comp(10306..10443)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_686_13
unknown

Not on your lists

comp(10450..10701)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_686_14
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10830..11885
DNA (1056bp) protein (352aa)
Sulfate transporter Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSS5_ALLVD
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:ADC62234.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
PLM3_60_coex_sep16_scaffold_686_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12045..12728
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H5J0_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL88277.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_686_16
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12721..13545
DNA (825bp) protein (275aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037ABFC3
ZIP family zinc transporter {ECO:0000313|EMBL:KJK13448.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
membrane protein
PLM3_60_coex_sep16_scaffold_686_17
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13645..13914
DNA (270bp) protein (90aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI0003644F80
Uncharacterized protein {ECO:0000313|EMBL:KJH71046.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_686_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13881..14798)
DNA (918bp) protein (306aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B3540A
hypothetical protein
Ribonuclease BN {ECO:0000313|EMBL:AEA27355.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_686_19
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14879..15322)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Actinopolyspora mortivallis RepID=UPI00037A5AC6
Uncharacterized protein {ECO:0000313|EMBL:KGI81752.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_686_20
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

15537..17651
DNA (2115bp) protein (705aa)
deh:cbdb_A127 endonuclease bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
endonuclease/exonuclease/phosphatase
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_686_21
unknown

Not on your lists

17757..18302
DNA (546bp) protein (182aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_686_22
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18306..18929)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000367A849
Transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCH34312.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_60_coex_sep16_scaffold_686_23
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18998..19999)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000379C6E5
Uncharacterized protein {ECO:0000313|EMBL:EWC59718.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
peptidase M48
PLM3_60_coex_sep16_scaffold_686_24
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20069..21031)
DNA (963bp) protein (321aa)
NLP/P60 protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTI4_ACIC1
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ABK52744.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_686_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21373..21714
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7N6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91557.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_686_26
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21728..22264
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KYY4_STRRC
Glycoprotein {ECO:0000313|EMBL:KIA64757.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
PLM3_60_coex_sep16_scaffold_686_27
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22264..23055
DNA (792bp) protein (264aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
Putative trehalose phosphatase Tax=Streptomyces scabies (strain 87.22) RepID=C9ZH58_STRSW
trehalose phosphatase
PLM3_60_coex_sep16_scaffold_686_28
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23063..23584
DNA (522bp) protein (174aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI0002E0B5EA
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ACL57915.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_60_coex_sep16_scaffold_686_29
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23581..25035)
DNA (1455bp) protein (485aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
alpha,alpha-trehalose-phosphate synthase Tax=Actinomadura flavalba RepID=UPI00035D6611
Alpha,alpha-trehalose-phosphate synthase {ECO:0000313|EMBL:ETK30821.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_686_30
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

25147..26298
DNA (1152bp) protein (384aa)
Putative uncharacterized protein Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQZ3_ALKMQ
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
Displaying items 1-30 of 43 in total

View Taxonomy