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PLM3_60_coex_sep16_scaffold_703

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_703_1
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1..552
DNA (552bp) protein (184aa)
RND transporter Tax=Micromonospora sp. CNB394 RepID=UPI000360FC44
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EWM67314.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
RND family efflux transporter MFP subunit
PLM3_60_coex_sep16_scaffold_703_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

591..1274
DNA (684bp) protein (228aa)
Macrolide ABC transporter ATP-binding protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PMG1_9ACTO
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU77165.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_703_3
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1271..2455
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Micromonospora RepID=E8S8Y1_MICSL
ABC transporter permease {ECO:0000313|EMBL:EWM67315.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_703_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2671..3240
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCG3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89992.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_703_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3258..4541)
DNA (1284bp) protein (428aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00037C6B61
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_703_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(4538..6430)
DNA (1893bp) protein (631aa)
Cell wall surface anchored protein bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_703_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6420..6953)
DNA (534bp) protein (178aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=Pseudomonas stutzeri NF13 RepID=M2VHV5_PSEST
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_703_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7035..7604)
DNA (570bp) protein (190aa)
ATP-dependent Clp protease ATP-binding subunit Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0T7_STRRD
ATP-dependent Clp protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:ACZ91099.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_703_9
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7605..7835)
DNA (231bp) protein (77aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI00023792F8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFL26208.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
PLM3_60_coex_sep16_scaffold_703_10

Not on your lists

comp(7903..8784)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2U6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKK71553.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_703_11
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..10440
DNA (1599bp) protein (533aa)
PimH protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09D61_STIAD
pimH; PimH protein
PimH protein {ECO:0000313|EMBL:EAU69668.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_60_coex_sep16_scaffold_703_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10899..11840)
DNA (942bp) protein (314aa)
ABC transporter related protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2Q0_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ38517.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_703_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11837..12715)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2Q1_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38518.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_703_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12835..13803)
DNA (969bp) protein (323aa)
ABC transporter related protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2Q2_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ38519.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_703_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13895..17203)
DNA (3309bp) protein (1103aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000360E60A
Uncharacterized protein {ECO:0000313|EMBL:AHG92321.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_703_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17294..18448
DNA (1155bp) protein (385aa)
Histone deacetylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4A5_THECD
Histone deacetylase
Histone deacetylase {ECO:0000313|EMBL:ACY99979.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_703_17
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18523..19290
DNA (768bp) protein (256aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003824D36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW05526.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
PLM3_60_coex_sep16_scaffold_703_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19287..20180
DNA (894bp) protein (298aa)
GTPase or GTP-binding protein-like protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCZ7_AMMDK
GTPase or GTP-binding protein-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_703_19
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20227..21045
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J4N8_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84302.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_703_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21042..22100
DNA (1059bp) protein (353aa)
NAD-dependent epimerase/dehydratase Tax=Frankia sp. CN3 RepID=G6HM79_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADP84301.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_703_21
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22097..23104
DNA (1008bp) protein (336aa)
Phospholipid/glycerol acyltransferase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4I5_GEOOG
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADB77135.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_703_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23194..24321
DNA (1128bp) protein (376aa)
Putative glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCH21507.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CCH21507.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035E6FD6
glycerophosphoryl diester phosphodiesterase
PLM3_60_coex_sep16_scaffold_703_23
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24408..25709)
DNA (1302bp) protein (434aa)
RNA polymerase sigma-70 factor, TIGR02952 family Tax=Streptomyces ipomoeae 91-03 RepID=L1L8W5_9ACTO
RNA polymerase sigma-70 factor, TIGR02952 family {ECO:0000313|EMBL:EKX69145.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
ECF sigma factor
PLM3_60_coex_sep16_scaffold_703_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(25815..26645)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Pseudoclavibacter faecalis RepID=UPI00036E6E91
sugar phosphate isomerase/epimerase-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_703_25
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26746..27432
DNA (687bp) protein (229aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZU2_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KGA12162.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_703_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

27429..27695
DNA (267bp) protein (89aa)
Glutaredoxin 2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBQ5_CONWI
glutaredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_703_27
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27781..28482
DNA (702bp) protein (234aa)
Redox-sensing transcriptional repressor Rex Tax=Streptomyces collinus Tu 365 RepID=S5V749_STRCU
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM3_60_coex_sep16_scaffold_703_28
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28488..29774
DNA (1287bp) protein (429aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037757AE
PLM3_60_coex_sep16_scaffold_703_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29761..30705
DNA (945bp) protein (315aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5US29_9MICO
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_703_30
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31469..32398
DNA (930bp) protein (310aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
delta-aminolevulinic acid dehydratase Tax=Nocardiopsis halotolerans RepID=UPI000347E32B
Displaying items 1-30 of 36 in total

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