ggKbase home page

PLM3_5_b1_sep16_scaffold_2226

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_2226_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1549)
DNA (1548bp) protein (516aa)
Glycogen debranching enzyme-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ91_RUBXD
glycogen debranching protein
Glycogen debranching enzyme-like protein {ECO:0000313|EMBL:ABG03287.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_5_b1_sep16_scaffold_2226_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2008..3558
DNA (1551bp) protein (517aa)
Putative ABC transporter ATP-binding protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG2_MICPN
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK34652.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2226_3
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3585..4658
DNA (1074bp) protein (358aa)
Putative ABC transporter ATP-binding protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG2_MICPN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN31152.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
ABC transporter ATP-binding protein
PLM3_5_b1_sep16_scaffold_2226_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4655..5515
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG3_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34653.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2226_5
Propionibacterium humerusii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5704..6300
DNA (597bp) protein (199aa)
30S ribosomal protein S16 Tax=Propionibacterium humerusii P08 RepID=F3NY44_9ACTO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium humerusii P08.;"
rpsP; 30S ribosomal protein S16
PLM3_5_b1_sep16_scaffold_2226_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6301..6570
DNA (270bp) protein (90aa)
UPF0109 protein MLP_16430 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG7_MICPN
hypothetical protein
UPF0109 protein MLP_16430 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2226_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6592..7122
DNA (531bp) protein (177aa)
Ribosome maturation factor RimM Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG8_MICPN
rimM; ribosome maturation factor RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2226_8
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7112..7831
DNA (720bp) protein (240aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037E0E6A
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM3_5_b1_sep16_scaffold_2226_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7833..8840
DNA (1008bp) protein (336aa)
Aminoglycoside phosphotransferase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTN0_PSEUX
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEA28533.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_5_b1_sep16_scaffold_2226_10
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8837..9850
DNA (1014bp) protein (338aa)
alcohol dehydrogenase Tax=Agromyces italicus RepID=UPI0003B2EABC
Alcohol dehydrogenase {ECO:0000313|EMBL:KGN38298.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
alcohol dehydrogenase GroES domain-containing protein
PLM3_5_b1_sep16_scaffold_2226_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9923..10636
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QIA0_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EWM13317.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_2226_12
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10661..11119)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00037BFA24
Mini-circle uncharacterized 19.1 kDa protein {ECO:0000313|EMBL:CQR65221.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_2226_13
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11450..12019
DNA (570bp) protein (190aa)
sdhC; succinate dehydrogenase cytochrome b subunit (EC:1.3.99.1)
Succinate dehydrogenase cytochrome b subunit {ECO:0000313|EMBL:BAK34669.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAK34669.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Succinate dehydrogenase cytochrome b subunit Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRH9_MICPN
PLM3_5_b1_sep16_scaffold_2226_14
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12016..13989
DNA (1974bp) protein (658aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAK34670.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAK34670.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI0_MICPN
PLM3_5_b1_sep16_scaffold_2226_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13986..14798
DNA (813bp) protein (271aa)
sdhB; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAK34671.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAK34671.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Succinate dehydrogenase flavoprotein subunit Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI1_MICPN
PLM3_5_b1_sep16_scaffold_2226_16
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14803..15150)
DNA (348bp) protein (116aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003810A01
Fumarate reductase subunit D {ECO:0000313|EMBL:EID78267.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
frdD; Fumarate reductase subunit D
PLM3_5_b1_sep16_scaffold_2226_17
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15147..15614)
DNA (468bp) protein (156aa)
Fumarate reductase subunit C Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKS5_AMYSD
Fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
PLM3_5_b1_sep16_scaffold_2226_18
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15611..16354)
DNA (744bp) protein (248aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Putative fumarate reductase Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
PLM3_5_b1_sep16_scaffold_2226_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16362..16832)
DNA (471bp) protein (157aa)
frdA; Putative fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
fumarate reductase flavoprotein subunit Tax=Kribbella catacumbae RepID=UPI00035C6254
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 19 items

View Taxonomy