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PLM3_5_b1_sep16_scaffold_1539

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_1539_trna_2
unknown

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comp(85..157)
DNA (73bp)
transferRNA His
PLM3_5_b1_sep16_scaffold_1539_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(237..866)
DNA (630bp) protein (210aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Oligoribonuclease Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XP96_MICPN
orn; oligoribonuclease
PLM3_5_b1_sep16_scaffold_1539_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(869..2170)
DNA (1302bp) protein (434aa)
Putative major facilitator superfamily transporter Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XP95_MICPN
major facilitator superfamily transporter
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:BAK36735.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_1539_trna_1
unknown

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2250..2322
DNA (73bp)
transferRNA Arg
PLM3_5_b1_sep16_scaffold_1539_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2420..3610
DNA (1191bp) protein (397aa)
UPI0003C7FCBE related cluster Tax=unknown RepID=UPI0003C7FCBE
Uncharacterized protein {ECO:0000313|EMBL:KHD75186.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Integrase family protein
PLM3_5_b1_sep16_scaffold_1539_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4038)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S53_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86418.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
PLM3_5_b1_sep16_scaffold_1539_5
unknown

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comp(4158..4529)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1539_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4810..5256)
DNA (447bp) protein (149aa)
pyridine nucleotide-disulfide oxidoreductase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268F5
trxB; response regulator/thioredoxin-disulfide reductase
Response regulator/thioredoxin-disulfide reductase {ECO:0000313|EMBL:AIJ23741.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_5_b1_sep16_scaffold_1539_7
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5283..6461)
DNA (1179bp) protein (393aa)
chemotaxis protein CheY Tax=Hymenobacter norwichensis RepID=UPI0003B6C2F3
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AHJ99756.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM3_5_b1_sep16_scaffold_1539_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7094..8101)
DNA (1008bp) protein (336aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG19_NAKMY
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACV80021.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_5_b1_sep16_scaffold_1539_9
unknown

Not on your lists

8242..8460
DNA (219bp) protein (73aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037A4A35
PLM3_5_b1_sep16_scaffold_1539_10
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8593..8967
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN29726.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
PLM3_5_b1_sep16_scaffold_1539_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9021..9644
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N4X5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGN29726.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1539_12
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9649..10131
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RQY5_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:KGN29725.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1539_13
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10128..10787
DNA (660bp) protein (220aa)
Predicted protein Tax=Streptomyces sp. SPB78 RepID=D9UI69_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGN29724.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
PLM3_5_b1_sep16_scaffold_1539_14
unknown

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11047..11175
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1539_15
unknown

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comp(11199..11426)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1539_16
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11973..12257)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nocardioides sp. CF8 RepID=R7XY18_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH79928.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1539_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12371..14143
DNA (1773bp) protein (591aa)
DNA primase catalytic core Tax=Nocardioides sp. CF8 RepID=R7XXV2_9ACTO
DNA primase catalytic core {ECO:0000313|EMBL:EON24197.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DNA primase catalytic core
Displaying 19 items

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