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PLM3_5_b1_sep16_scaffold_257

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_257_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
short-chain dehydrogenase Tax=Amycolatopsis nigrescens RepID=UPI00037CE4F1
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK34351.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118..1563)
DNA (1446bp) protein (482aa)
Putative oxidoreductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPP4_MICPN
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK34352.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1578..2477)
DNA (900bp) protein (300aa)
Hypothetical membrane protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPP5_MICPN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK34353.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2537..2986
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPQ4_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34362.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_5
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3094..4296
DNA (1203bp) protein (401aa)
Divalent metal cation transporter MntH Tax=Rhodococcus pyridinivorans AK37 RepID=H0JUG1_9NOCA
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
divalent cation-transport integral membrane protein
PLM3_5_b1_sep16_scaffold_257_6

Not on your lists

comp(4308..4814)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000378752F
Marine sediment metagenome DNA, contig: S01H1_S27803 {ECO:0000313|EMBL:GAG30349.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_257_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4948..5577)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI0003707A10
maf protein
Maf protein {ECO:0000313|EMBL:ADB30537.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_5_b1_sep16_scaffold_257_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5584..7305)
DNA (1722bp) protein (574aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WFE9_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62623.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_257_9
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7395..7997)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Rhodococcus opacus (strain B4) RepID=C1ATD5_RHOOB
Uncharacterized protein {ECO:0000313|EMBL:KGN42629.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_257_10
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8314..9900)
DNA (1587bp) protein (529aa)
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) Tax=Saccharomonospora cyanea NA-134 RepID=H5XIL4_9PSEU
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:EHR59616.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
PLM3_5_b1_sep16_scaffold_257_11
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

9970..10785
DNA (816bp) protein (272aa)
Putative transcriptional regulator/biotin protein ligase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPR0_MICPN
birA; transcriptional regulator/biotin protein ligase
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM3_5_b1_sep16_scaffold_257_12
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10919..11461
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPR1_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34369.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_13
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11506..12249
DNA (744bp) protein (248aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003656658
enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:AIJ13731.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_5_b1_sep16_scaffold_257_14
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12246..12707
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Rhodococcus aetherivorans RepID=C7U1M9_9NOCA
GtrA family protein {ECO:0000313|EMBL:ETT25438.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
GtrA-like protein
PLM3_5_b1_sep16_scaffold_257_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12704..13879
DNA (1176bp) protein (392aa)
purK; 5-(carboxyamino)imidazole ribonucleotide synthase (EC:6.3.4.18)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
5-(Carboxyamino)imidazole ribonucleotide synthase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPR6_MICPN
PLM3_5_b1_sep16_scaffold_257_16
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13872..14402
DNA (531bp) protein (177aa)
purE; 5-(carboxyamino)imidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPR7_MICPN
PLM3_5_b1_sep16_scaffold_257_17
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14440..15171
DNA (732bp) protein (244aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000369482C
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AAZ54672.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_5_b1_sep16_scaffold_257_18
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15200..15940
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQV2_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36974.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_257_19
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15937..17157
DNA (1221bp) protein (407aa)
Oxidoreductase Tax=Arthrobacter sp. AK-YN10 RepID=U1YS84_9MICC
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:KIA74556.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
oxidoreductase
PLM3_5_b1_sep16_scaffold_257_20
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17123..18289
DNA (1167bp) protein (389aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAK36966.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAK36966.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Acyl-CoA dehydrogenase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQU4_MICPN
PLM3_5_b1_sep16_scaffold_257_21
unknown

Not on your lists

18339..18722
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_257_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18719..19408
DNA (690bp) protein (230aa)
Filamentation induced by cAMP protein Fic Tax=Hydrogenophaga sp. PBC RepID=I4MMP7_9BURK
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EIK90487.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
HTH domain-containing protein
PLM3_5_b1_sep16_scaffold_257_23
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19425..20186
DNA (762bp) protein (254aa)
hyi; hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Hydroxypyruvate isomerase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLG2_MICPN
Displaying 23 items

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