ggKbase home page

PLM3_5_b1_sep16_scaffold_326

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_326_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228..515)
DNA (288bp) protein (96aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Modestobacter marinus (strain BC501) RepID=I4EW95_MODMB
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCH87658.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_5_b1_sep16_scaffold_326_2
unknown

Not on your lists

comp(479..613)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_326_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

924..1418
DNA (495bp) protein (165aa)
icmt; Protein-S-isoprenylcysteine O-methyltransferase (EC:2.1.1.100)
Protein-S-isoprenylcysteine O-methyltransferase {ECO:0000313|EMBL:AEV84226.1}; EC=2.1.1.100 {ECO:0000313|EMBL:AEV84226.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Protein-S-isoprenylcysteine O-methyltransferase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SGB0_ACTS5
PLM3_5_b1_sep16_scaffold_326_4
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1740..2069
DNA (330bp) protein (110aa)
Transcriptional regulator, XRE family Tax=Frankia sp. (strain CcI3) RepID=Q2JEV1_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDA40992.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM3_5_b1_sep16_scaffold_326_5
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2069..2887
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Frankia sp. (strain CcI3) RepID=Q2JEV0_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDA40991.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM3_5_b1_sep16_scaffold_326_6
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2989..3639)
DNA (651bp) protein (217aa)
DNA-Invertase BINR Tax=Arthrobacter gangotriensis Lz1y RepID=M7NFS6_9MICC
DNA-Invertase BINR {ECO:0000313|EMBL:EMQ97343.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
resolvase
PLM3_5_b1_sep16_scaffold_326_7
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3802..4869)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003658DDA
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADU49996.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_5_b1_sep16_scaffold_326_8
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4866..5405)
DNA (540bp) protein (180aa)
isoprenylcysteine carboxyl methyltransferase Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003803D54
Membrane protein {ECO:0000313|EMBL:KJK10319.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
Isoprenylcysteine carboxyl methyltransferase
PLM3_5_b1_sep16_scaffold_326_9
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5751..6569
DNA (819bp) protein (273aa)
membrane protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376DE48
UbiA prenyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:ADU49999.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_5_b1_sep16_scaffold_326_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6541..7626)
DNA (1086bp) protein (362aa)
Chalcone synthase {ECO:0000313|EMBL:EWC62497.1}; EC=2.3.1.74 {ECO:0000313|EMBL:EWC62497.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Chalcone and stilbene synthase domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5V1_GEOOG
chalcone and stilbene synthase domain-containing protein
PLM3_5_b1_sep16_scaffold_326_11
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8166..8717)
DNA (552bp) protein (184aa)
Resolvase domain protein Tax=Mycobacterium tusciae JS617 RepID=H1JYN6_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KKC05002.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
site-specific DNA recombinase/resolvase
PLM3_5_b1_sep16_scaffold_326_12
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(9341..9793)
DNA (453bp) protein (151aa)
hypothetical protein bin=CD_OP8_4m species=Nocardiopsis chromatogenes genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_13_Aminicenantes_62_12_curated
PLM3_5_b1_sep16_scaffold_326_13
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(9790..10380)
DNA (591bp) protein (197aa)
Methyltransferase type 11 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Methyltransferase type 11
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_5_b1_sep16_scaffold_326_14
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11028..11186)
DNA (159bp) protein (53aa)
Aldo/keto reductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMK9_MICPN
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:BAK33932.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_326_15
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11216..11752)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037D59EF
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:ACU86263.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
PLM3_5_b1_sep16_scaffold_326_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11864..13306)
DNA (1443bp) protein (481aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQA4_NOCSJ
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABL83989.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_5_b1_sep16_scaffold_326_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13520..13879
DNA (360bp) protein (120aa)
DGPFAETKE family protein Tax=Nocardioides sp. CF8 RepID=R7XT67_9ACTO
DGPFAETKE family protein {ECO:0000313|EMBL:EON22503.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
YCII--like protein
PLM3_5_b1_sep16_scaffold_326_18
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13876..15081
DNA (1206bp) protein (402aa)
Putative RNA polymerase ECF-subfamily sigma factor Tax=Janibacter sp. HTCC2649 RepID=A3TR83_9MICO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGN28815.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
sigma-70 region 2 domain-containing protein
PLM3_5_b1_sep16_scaffold_326_19
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15184..15819
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4R8Q1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK32666.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_5_b1_sep16_scaffold_326_20
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15928..16413)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V6I4_9MICC
ATPase {ECO:0000313|EMBL:KHD73594.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_326_21
unknown

Not on your lists

16604..16837
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_326_22
unknown

Not on your lists

16831..16920
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 22 items

View Taxonomy