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PLM3_30_b1_sep16_scaffold_1062

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1062_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..1155
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036D3731
Glycoside hydrolase family 28 {ECO:0000313|EMBL:EHQ29188.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
exo-poly-alpha-D-galacturonosidase
PLM3_30_b1_sep16_scaffold_1062_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1394..2737)
DNA (1344bp) protein (448aa)
Glycosyl hydrolase family 88 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPV9_NIAKG
glycosyl hydrolase family protein
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AEV99953.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1062_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2837..4375)
DNA (1539bp) protein (513aa)
RagB/SusD domain-containing protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCP4_9SPHI
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ24231.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD domain-containing protein
PLM3_30_b1_sep16_scaffold_1062_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4395..7622)
DNA (3228bp) protein (1076aa)
TonB-dependent receptor plug Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCP5_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ24232.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor plug
PLM3_30_b1_sep16_scaffold_1062_5
unknown

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7845..8213
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1062_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8245..9036)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Sphingobacterium sp. (strain 21) RepID=F4CFM0_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KIC93986.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9225..10316)
DNA (1092bp) protein (364aa)
Radical SAM domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9C1_NIAKG
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEV98089.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1062_8
unknown

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comp(10294..10638)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1062_9
unknown

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comp(10760..11227)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1062_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11308..12222)
DNA (915bp) protein (305aa)
Pirin Tax=Pontibacter sp. BAB1700 RepID=J0LHH6_9BACT
Pirin-like protein {ECO:0000313|EMBL:GAO44007.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
pirin
PLM3_30_b1_sep16_scaffold_1062_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12324..12623
DNA (300bp) protein (100aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000378DAD1
Putative acyltransferase {ECO:0000313|EMBL:GAO44530.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13108..13596
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR66_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94607.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13785..14165
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR67_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94606.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_14
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14186..15106
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BS60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80748.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15116..15988)
DNA (873bp) protein (291aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AEV99026.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AEV99026.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2-hydroxy-3-oxopropionate reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T705_NIAKG
2-hydroxy-3-oxopropionate reductase
PLM3_30_b1_sep16_scaffold_1062_16
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16026..17105)
DNA (1080bp) protein (360aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:ACU05243.1}; EC=2.7.1.31 {ECO:0000313|EMBL:ACU05243.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037EF461
PLM3_30_b1_sep16_scaffold_1062_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17154..18938)
DNA (1785bp) protein (595aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D82A2
lactate permease
Lactate permease {ECO:0000313|EMBL:AKD57204.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PLM3_30_b1_sep16_scaffold_1062_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19134..21332)
DNA (2199bp) protein (733aa)
Uncharacterized protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPL1_SPILD
Uncharacterized protein {ECO:0000313|EMBL:ADB40670.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1062_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21548..22411
DNA (864bp) protein (288aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E3F32
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96665.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1062_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23269..23832
DNA (564bp) protein (188aa)
glucosidase Tax=Eudoraea adriatica RepID=UPI00036C18E4
Glucosidase {ECO:0000313|EMBL:KIC93812.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
Displaying 20 items

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